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  5. MA_3931g0010

MA_3931g0010


Description : PHD finger transcription factor


Gene families : OG0000311 (Archaeplastida) Phylogenetic Tree(s): OG0000311_tree ,
OG_05_0000567 (LandPlants) Phylogenetic Tree(s): OG_05_0000567_tree ,
OG_06_0004205 (SeedPlants) Phylogenetic Tree(s): OG_06_0004205_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_3931g0010
Cluster HCCA: Cluster_509

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00102710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.03 Archaeplastida
AMTR_s00140p00029580 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.05 Archaeplastida
AMTR_s00146p00080830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.02 Archaeplastida
AT2G27980 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.03 Archaeplastida
AT5G36740 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.02 Archaeplastida
Cre01.g018200 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.03 Archaeplastida
Cre16.g694208 No alias No description available 0.05 Archaeplastida
GSVIVT01014219001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.03 Archaeplastida
GSVIVT01017972001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.03 Archaeplastida
GSVIVT01033711001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.02 Archaeplastida
Gb_41247 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.02 Archaeplastida
LOC_Os04g59510.1 No alias PHD finger transcription factor 0.03 Archaeplastida
LOC_Os06g01170.1 No alias PHD finger transcription factor 0.02 Archaeplastida
LOC_Os07g07690.1 No alias PHD finger transcription factor 0.02 Archaeplastida
MA_139275g0010 No alias PHD finger transcription factor 0.05 Archaeplastida
MA_14500g0010 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.07 Archaeplastida
Mp2g04330.1 No alias PHD finger transcription factor 0.05 Archaeplastida
Mp6g21090.2 No alias PHD finger transcription factor 0.02 Archaeplastida
Pp3c14_7890V3.1 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.02 Archaeplastida
Pp3c1_22210V3.1 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.03 Archaeplastida
Pp3c25_4970V3.1 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.02 Archaeplastida
Pp3c25_9550V3.1 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.05 Archaeplastida
Solyc03g005170.3.1 No alias PHD finger transcription factor 0.03 Archaeplastida
Solyc09g076010.3.1 No alias PHD finger transcription factor 0.03 Archaeplastida
Solyc11g066480.2.1 No alias PHD finger transcription factor 0.03 Archaeplastida
Zm00001e005667_P001 No alias PHD finger transcription factor 0.05 Archaeplastida
Zm00001e013368_P001 No alias PHD finger transcription factor 0.04 Archaeplastida
Zm00001e029784_P001 No alias PHD finger transcription factor 0.03 Archaeplastida
Zm00001e032904_P002 No alias PHD finger transcription factor 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008080 N-acetyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0003689 DNA clamp loader activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
CC GO:0005663 DNA replication factor C complex IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006354 DNA-templated transcription, elongation IEP Neighborhood
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
CC GO:0008023 transcription elongation factor complex IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
CC GO:0016593 Cdc73/Paf1 complex IEP Neighborhood
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Neighborhood
MF GO:0033170 protein-DNA loading ATPase activity IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000182 GNAT_dom 66 138
No external refs found!