AT1G25330


Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG0000051 (Archaeplastida) Phylogenetic Tree(s): OG0000051_tree ,
OG_05_0000091 (LandPlants) Phylogenetic Tree(s): OG_05_0000091_tree ,
OG_06_0010212 (SeedPlants) Phylogenetic Tree(s): OG_06_0010212_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G25330
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00245920 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.03 Archaeplastida
AMTR_s00016p00138470 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.03 Archaeplastida
AMTR_s00079p00137860 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.04 Archaeplastida
AT1G26260 CIB5 cryptochrome-interacting basic-helix-loop-helix 5 0.04 Archaeplastida
AT4G34530 CIB1 cryptochrome-interacting basic-helix-loop-helix 1 0.05 Archaeplastida
AT5G48560 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT5G50915 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT5G58010 LRL3 LJRHL1-like 3 0.04 Archaeplastida
GSVIVT01011873001 No alias External stimuli response.light.UV-A/blue... 0.02 Archaeplastida
GSVIVT01032055001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
Gb_05320 No alias transcription factor (bHLH) 0.02 Archaeplastida
Gb_07223 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.01 Archaeplastida
Gb_36369 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
LOC_Os01g67480.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os02g47660.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
LOC_Os06g08500.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os08g39630.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os09g25040.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os09g31300.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_10432919g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
MA_10435000g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_120179g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_13676g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
MA_158362g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
MA_42080g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
MA_9115341g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.06 Archaeplastida
Mpzg01410.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Pp3c12_25990V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c17_17000V3.1 No alias LJRHL1-like 1 0.02 Archaeplastida
Pp3c2_620V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c6_9520V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
Pp3c9_3300V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Smo402301 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
Smo425336 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
Smo444782 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Solyc02g062690.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Solyc03g113560.4.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Solyc03g119390.4.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
Solyc04g005130.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Solyc04g005220.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
Solyc04g007300.4.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.05 Archaeplastida
Solyc04g077480.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
Solyc05g006650.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.06 Archaeplastida
Solyc06g065040.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc06g083170.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Solyc12g010170.2.1 No alias transcription factor (bHLH) 0.07 Archaeplastida
Solyc12g036470.2.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.05 Archaeplastida
Solyc12g098620.2.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Zm00001e000921_P005 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
Zm00001e010060_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e011084_P002 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
Zm00001e021418_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e022005_P003 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Zm00001e032950_P002 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e034528_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e036318_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IMP Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
BP GO:0048441 petal development RCA Interproscan
BP GO:0048443 stamen development RCA Interproscan
BP GO:2000488 positive regulation of brassinosteroid biosynthetic process IMP Interproscan
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004452 isopentenyl-diphosphate delta-isomerase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005496 steroid binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005615 extracellular space IEP Neighborhood
MF GO:0008142 oxysterol binding IEP Neighborhood
MF GO:0008195 phosphatidate phosphatase activity IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
BP GO:0009806 lignan metabolic process IEP Neighborhood
BP GO:0009807 lignan biosynthetic process IEP Neighborhood
BP GO:0009835 fruit ripening IEP Neighborhood
BP GO:0009856 pollination IEP Neighborhood
BP GO:0009914 hormone transport IEP Neighborhood
BP GO:0009926 auxin polar transport IEP Neighborhood
MF GO:0009975 cyclase activity IEP Neighborhood
BP GO:0010115 regulation of abscisic acid biosynthetic process IEP Neighborhood
BP GO:0010143 cutin biosynthetic process IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0010334 sesquiterpene synthase activity IEP Neighborhood
BP GO:0010337 regulation of salicylic acid metabolic process IEP Neighborhood
BP GO:0010541 acropetal auxin transport IEP Neighborhood
BP GO:0010565 regulation of cellular ketone metabolic process IEP Neighborhood
BP GO:0010942 positive regulation of cell death IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0018904 ether metabolic process IEP Neighborhood
BP GO:0019217 regulation of fatty acid metabolic process IEP Neighborhood
BP GO:0019747 regulation of isoprenoid metabolic process IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0031540 regulation of anthocyanin biosynthetic process IEP Neighborhood
MF GO:0031559 oxidosqualene cyclase activity IEP Neighborhood
MF GO:0032934 sterol binding IEP Neighborhood
MF GO:0042299 lupeol synthase activity IEP Neighborhood
MF GO:0042300 beta-amyrin synthase activity IEP Neighborhood
BP GO:0042304 regulation of fatty acid biosynthetic process IEP Neighborhood
MF GO:0042349 guiding stereospecific synthesis activity IEP Neighborhood
BP GO:0043473 pigmentation IEP Neighborhood
BP GO:0043476 pigment accumulation IEP Neighborhood
BP GO:0043478 pigment accumulation in response to UV light IEP Neighborhood
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP Neighborhood
BP GO:0043480 pigment accumulation in tissues IEP Neighborhood
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP Neighborhood
BP GO:0046246 terpene biosynthetic process IEP Neighborhood
MF GO:0046577 long-chain-alcohol oxidase activity IEP Neighborhood
BP GO:0048653 anther development IEP Neighborhood
BP GO:0051761 sesquiterpene metabolic process IEP Neighborhood
BP GO:0051762 sesquiterpene biosynthetic process IEP Neighborhood
BP GO:0060918 auxin transport IEP Neighborhood
BP GO:0062012 regulation of small molecule metabolic process IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0080016 (-)-E-beta-caryophyllene synthase activity IEP Neighborhood
MF GO:0080017 alpha-humulene synthase activity IEP Neighborhood
BP GO:0080027 response to herbivore IEP Neighborhood
BP GO:0080140 regulation of jasmonic acid metabolic process IEP Neighborhood
BP GO:0080141 regulation of jasmonic acid biosynthetic process IEP Neighborhood
BP GO:0080142 regulation of salicylic acid biosynthetic process IEP Neighborhood
MF GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity IEP Neighborhood
BP GO:1901503 ether biosynthetic process IEP Neighborhood
BP GO:1901598 (-)-pinoresinol metabolic process IEP Neighborhood
BP GO:1901599 (-)-pinoresinol biosynthetic process IEP Neighborhood
BP GO:1902930 regulation of alcohol biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 114 161
No external refs found!