1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_438875g0010

MA_438875g0010


Description : ubiquitin-conjugating E2 protein (PHO2)


Gene families : OG0000613 (Archaeplastida) Phylogenetic Tree(s): OG0000613_tree ,
OG_05_0008038 (LandPlants) Phylogenetic Tree(s): OG_05_0008038_tree ,
OG_06_0018597 (SeedPlants) Phylogenetic Tree(s): OG_06_0018597_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_438875g0010
Cluster HCCA: Cluster_516

Target Alias Description ECC score Gene Family Method Actions
Cre08.g383702 No alias Putative ubiquitin-conjugating enzyme E2 39... 0.01 Archaeplastida
Cre12.g510300 No alias Probable ubiquitin-conjugating enzyme E2 25... 0.03 Archaeplastida
GSVIVT01024005001 No alias Probable ubiquitin-conjugating enzyme E2 23... 0.06 Archaeplastida
Gb_29475 No alias ubiquitin-conjugating E2 protein (PHO2) 0.02 Archaeplastida
LOC_Os01g03520.1 No alias Probable ubiquitin-conjugating enzyme E2 23... 0.02 Archaeplastida
MA_170925g0010 No alias Probable ubiquitin-conjugating enzyme E2 23... 0.01 Archaeplastida
MA_248802g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e016384_P002 No alias Probable ubiquitin-conjugating enzyme E2 26... 0.02 Archaeplastida
Zm00001e025713_P002 No alias Probable ubiquitin-conjugating enzyme E2 23... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0017056 structural constituent of nuclear pore IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
MF GO:0031369 translation initiation factor binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!