AT5G50920 (HSP93-V, DCA1,...)


Aliases : HSP93-V, DCA1, ATHSP93-V, CLPC, CLPC1

Description : CLPC homologue 1


Gene families : OG0000276 (Archaeplastida) Phylogenetic Tree(s): OG0000276_tree ,
OG_05_0002249 (LandPlants) Phylogenetic Tree(s): OG_05_0002249_tree ,
OG_06_0002384 (SeedPlants) Phylogenetic Tree(s): OG_06_0002384_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G50920
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00164160 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.05 Archaeplastida
AMTR_s00065p00179810 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.05 Archaeplastida
AMTR_s00110p00042430 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.06 Archaeplastida
Cpa|evm.model.tig00001416.8 No alias Chaperone protein ClpC2, chloroplastic OS=Arabidopsis thaliana 0.02 Archaeplastida
Cpa|evm.model.tig00020563.86 No alias External stimuli response.temperature.Hsp... 0.02 Archaeplastida
Cre43.g760497 No alias Chaperone protein ClpC1, chloroplastic OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01008636001 No alias External stimuli response.temperature.Hsp... 0.07 Archaeplastida
Gb_20703 No alias chaperone component ClpC of chloroplast Clp-type protease complex 0.04 Archaeplastida
LOC_Os02g32520.1 No alias chaperone component ClpD of chloroplast Clp-type protease complex 0.03 Archaeplastida
LOC_Os12g12850.1 No alias chaperone component ClpC of chloroplast Clp-type protease complex 0.05 Archaeplastida
MA_229920g0010 No alias Chaperone protein ClpB2, chloroplastic OS=Oryza sativa... 0.03 Archaeplastida
MA_8117g0010 No alias ATP-dependent Clp protease ATP-binding subunit ClpA... 0.06 Archaeplastida
Mp1g02560.1 No alias chaperone component ClpC of chloroplast Clp-type protease complex 0.02 Archaeplastida
Pp3c16_17640V3.1 No alias CLPC homologue 1 0.02 Archaeplastida
Pp3c3_18360V3.1 No alias CLPC homologue 1 0.03 Archaeplastida
Pp3c5_23010V3.1 No alias CLPC homologue 1 0.04 Archaeplastida
Pp3c6_7360V3.1 No alias CLPC homologue 1 0.04 Archaeplastida
Smo439163 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
Solyc12g042060.3.1 No alias chaperone component ClpC of chloroplast Clp-type protease complex 0.13 Archaeplastida
Zm00001e008312_P001 No alias chaperone component ClpC of chloroplast Clp-type protease complex 0.05 Archaeplastida
Zm00001e014692_P001 No alias chaperone component ClpD of chloroplast Clp-type protease complex 0.04 Archaeplastida
Zm00001e039805_P002 No alias chaperone component ClpC of chloroplast Clp-type protease complex 0.05 Archaeplastida
Zm00001e040778_P001 No alias chaperone component ClpC of chloroplast Clp-type protease complex 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IDA Interproscan
MF GO:0005524 ATP binding ISS Interproscan
CC GO:0005618 cell wall IDA Interproscan
CC GO:0005739 mitochondrion IDA Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009532 plastid stroma IDA Interproscan
CC GO:0009535 chloroplast thylakoid membrane IDA Interproscan
CC GO:0009536 plastid IDA Interproscan
CC GO:0009570 chloroplast stroma IDA Interproscan
BP GO:0009658 chloroplast organization IMP Interproscan
CC GO:0009706 chloroplast inner membrane IDA Interproscan
BP GO:0009735 response to cytokinin IDA Interproscan
BP GO:0009902 chloroplast relocation RCA Interproscan
CC GO:0009941 chloroplast envelope IDA Interproscan
BP GO:0010027 thylakoid membrane organization RCA Interproscan
BP GO:0010304 PSII associated light-harvesting complex II catabolic process RCA Interproscan
BP GO:0010380 regulation of chlorophyll biosynthetic process IMP Interproscan
MF GO:0016887 ATPase activity ISS Interproscan
CC GO:0031897 Tic complex TAS Interproscan
BP GO:0034660 ncRNA metabolic process RCA Interproscan
BP GO:0042744 hydrogen peroxide catabolic process RCA Interproscan
BP GO:0042793 plastid transcription RCA Interproscan
BP GO:0045036 protein targeting to chloroplast IMP Interproscan
BP GO:0045037 protein import into chloroplast stroma IMP Interproscan
Type GO Term Name Evidence Source
BP GO:0000304 response to singlet oxygen IEP Neighborhood
BP GO:0002376 immune system process IEP Neighborhood
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Neighborhood
MF GO:0003951 NAD+ kinase activity IEP Neighborhood
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004177 aminopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004331 fructose-2,6-bisphosphate 2-phosphatase activity IEP Neighborhood
MF GO:0004462 lactoylglutathione lyase activity IEP Neighborhood
MF GO:0004760 serine-pyruvate transaminase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005247 voltage-gated chloride channel activity IEP Neighborhood
MF GO:0005253 anion channel activity IEP Neighborhood
MF GO:0005254 chloride channel activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005773 vacuole IEP Neighborhood
CC GO:0005779 integral component of peroxisomal membrane IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0006000 fructose metabolic process IEP Neighborhood
BP GO:0006002 fructose 6-phosphate metabolic process IEP Neighborhood
BP GO:0006003 fructose 2,6-bisphosphate metabolic process IEP Neighborhood
BP GO:0006090 pyruvate metabolic process IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006664 glycolipid metabolic process IEP Neighborhood
BP GO:0006732 coenzyme metabolic process IEP Neighborhood
BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006787 porphyrin-containing compound catabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006821 chloride transport IEP Neighborhood
BP GO:0006857 oligopeptide transport IEP Neighborhood
BP GO:0006873 cellular ion homeostasis IEP Neighborhood
BP GO:0006875 cellular metal ion homeostasis IEP Neighborhood
BP GO:0006879 cellular iron ion homeostasis IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0006955 immune response IEP Neighborhood
BP GO:0008219 cell death IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0008300 isoprenoid catabolic process IEP Neighborhood
MF GO:0008308 voltage-gated anion channel activity IEP Neighborhood
MF GO:0008443 phosphofructokinase activity IEP Neighborhood
MF GO:0008453 alanine-glyoxylate transaminase activity IEP Neighborhood
BP GO:0009247 glycolipid biosynthetic process IEP Neighborhood
CC GO:0009368 endopeptidase Clp complex IEP Neighborhood
BP GO:0009423 chorismate biosynthetic process IEP Neighborhood
CC GO:0009527 plastid outer membrane IEP Neighborhood
CC GO:0009534 chloroplast thylakoid IEP Neighborhood
CC GO:0009579 thylakoid IEP Neighborhood
BP GO:0009583 detection of light stimulus IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009626 plant-type hypersensitive response IEP Neighborhood
BP GO:0009637 response to blue light IEP Neighborhood
BP GO:0009638 phototropism IEP Neighborhood
CC GO:0009707 chloroplast outer membrane IEP Neighborhood
BP GO:0009743 response to carbohydrate IEP Neighborhood
BP GO:0009785 blue light signaling pathway IEP Neighborhood
CC GO:0009840 chloroplastic endopeptidase Clp complex IEP Neighborhood
MF GO:0009881 photoreceptor activity IEP Neighborhood
MF GO:0009882 blue light photoreceptor activity IEP Neighborhood
BP GO:0009893 positive regulation of metabolic process IEP Neighborhood
CC GO:0009898 cytoplasmic side of plasma membrane IEP Neighborhood
BP GO:0009903 chloroplast avoidance movement IEP Neighborhood
BP GO:0009904 chloroplast accumulation movement IEP Neighborhood
BP GO:0009965 leaf morphogenesis IEP Neighborhood
CC GO:0009986 cell surface IEP Neighborhood
BP GO:0010039 response to iron ion IEP Neighborhood
BP GO:0010155 regulation of proton transport IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
BP GO:0010190 cytochrome b6f complex assembly IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
BP GO:0010239 chloroplast mRNA processing IEP Neighborhood
CC GO:0010318 pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex IEP Neighborhood
BP GO:0010343 singlet oxygen-mediated programmed cell death IEP Neighborhood
BP GO:0010360 negative regulation of anion channel activity IEP Neighborhood
BP GO:0010361 regulation of anion channel activity by blue light IEP Neighborhood
BP GO:0010362 negative regulation of anion channel activity by blue light IEP Neighborhood
MF GO:0010436 carotenoid dioxygenase activity IEP Neighborhood
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010617 circadian regulation of calcium ion oscillation IEP Neighborhood
BP GO:0010628 positive regulation of gene expression IEP Neighborhood
BP GO:0012501 programmed cell death IEP Neighborhood
MF GO:0015108 chloride transmembrane transporter activity IEP Neighborhood
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
MF GO:0015421 oligopeptide-transporting ATPase activity IEP Neighborhood
MF GO:0015440 peptide-transporting ATPase activity IEP Neighborhood
BP GO:0015994 chlorophyll metabolic process IEP Neighborhood
BP GO:0015996 chlorophyll catabolic process IEP Neighborhood
BP GO:0016036 cellular response to phosphate starvation IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0016110 tetraterpenoid catabolic process IEP Neighborhood
BP GO:0016115 terpenoid catabolic process IEP Neighborhood
BP GO:0016118 carotenoid catabolic process IEP Neighborhood
BP GO:0016119 carotene metabolic process IEP Neighborhood
BP GO:0016121 carotene catabolic process IEP Neighborhood
BP GO:0016122 xanthophyll metabolic process IEP Neighborhood
BP GO:0016124 xanthophyll catabolic process IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0016556 mRNA modification IEP Neighborhood
BP GO:0016559 peroxisome fission IEP Neighborhood
MF GO:0016688 L-ascorbate peroxidase activity IEP Neighborhood
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
BP GO:0019362 pyridine nucleotide metabolic process IEP Neighborhood
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Neighborhood
BP GO:0019374 galactolipid metabolic process IEP Neighborhood
BP GO:0019375 galactolipid biosynthetic process IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0030003 cellular cation homeostasis IEP Neighborhood
BP GO:0030522 intracellular receptor signaling pathway IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Neighborhood
BP GO:0031279 regulation of cyclase activity IEP Neighborhood
BP GO:0031325 positive regulation of cellular metabolic process IEP Neighborhood
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
BP GO:0031425 chloroplast RNA processing IEP Neighborhood
BP GO:0031647 regulation of protein stability IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
CC GO:0031976 plastid thylakoid IEP Neighborhood
CC GO:0031984 organelle subcompartment IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032410 negative regulation of transporter activity IEP Neighborhood
BP GO:0032413 negative regulation of ion transmembrane transporter activity IEP Neighborhood
MF GO:0032441 pheophorbide a oxygenase activity IEP Neighborhood
BP GO:0032879 regulation of localization IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033015 tetrapyrrole catabolic process IEP Neighborhood
MF GO:0033220 amide-transporting ATPase activity IEP Neighborhood
BP GO:0034050 host programmed cell death induced by symbiont IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034762 regulation of transmembrane transport IEP Neighborhood
BP GO:0034763 negative regulation of transmembrane transport IEP Neighborhood
BP GO:0034765 regulation of ion transmembrane transport IEP Neighborhood
BP GO:0034766 negative regulation of ion transmembrane transport IEP Neighborhood
BP GO:0035303 regulation of dephosphorylation IEP Neighborhood
BP GO:0035304 regulation of protein dephosphorylation IEP Neighborhood
BP GO:0035672 oligopeptide transmembrane transport IEP Neighborhood
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Neighborhood
BP GO:0036473 cell death in response to oxidative stress IEP Neighborhood
MF GO:0038023 signaling receptor activity IEP Neighborhood
BP GO:0042214 terpene metabolic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
MF GO:0042887 amide transmembrane transporter activity IEP Neighborhood
BP GO:0043269 regulation of ion transport IEP Neighborhood
BP GO:0043271 negative regulation of ion transport IEP Neighborhood
BP GO:0043609 regulation of carbon utilization IEP Neighborhood
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
BP GO:0045038 protein import into chloroplast thylakoid membrane IEP Neighborhood
BP GO:0045087 innate immune response IEP Neighborhood
MF GO:0045549 9-cis-epoxycarotenoid dioxygenase activity IEP Neighborhood
MF GO:0045551 cinnamyl-alcohol dehydrogenase activity IEP Neighborhood
BP GO:0045893 positive regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0046149 pigment catabolic process IEP Neighborhood
BP GO:0046247 terpene catabolic process IEP Neighborhood
BP GO:0046417 chorismate metabolic process IEP Neighborhood
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
BP GO:0046777 protein autophosphorylation IEP Neighborhood
MF GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0048509 regulation of meristem development IEP Neighborhood
BP GO:0048513 animal organ development IEP Neighborhood
BP GO:0048878 chemical homeostasis IEP Neighborhood
MF GO:0050281 serine-glyoxylate transaminase activity IEP Neighborhood
MF GO:0050308 sugar-phosphatase activity IEP Neighborhood
BP GO:0050801 ion homeostasis IEP Neighborhood
BP GO:0050821 protein stabilization IEP Neighborhood
BP GO:0051049 regulation of transport IEP Neighborhood
BP GO:0051051 negative regulation of transport IEP Neighborhood
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051254 positive regulation of RNA metabolic process IEP Neighborhood
BP GO:0051341 regulation of oxidoreductase activity IEP Neighborhood
BP GO:0051353 positive regulation of oxidoreductase activity IEP Neighborhood
BP GO:0051480 regulation of cytosolic calcium ion concentration IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0055065 metal ion homeostasis IEP Neighborhood
BP GO:0055072 iron ion homeostasis IEP Neighborhood
BP GO:0055076 transition metal ion homeostasis IEP Neighborhood
BP GO:0055080 cation homeostasis IEP Neighborhood
BP GO:0055082 cellular chemical homeostasis IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood
BP GO:0072524 pyridine-containing compound metabolic process IEP Neighborhood
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Neighborhood
BP GO:0090342 regulation of cell aging IEP Neighborhood
BP GO:0090407 organophosphate biosynthetic process IEP Neighborhood
BP GO:0097468 programmed cell death in response to reactive oxygen species IEP Neighborhood
CC GO:0098552 side of membrane IEP Neighborhood
CC GO:0098562 cytoplasmic side of membrane IEP Neighborhood
BP GO:0098771 inorganic ion homeostasis IEP Neighborhood
BP GO:1901259 chloroplast rRNA processing IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
BP GO:1902171 regulation of tocopherol cyclase activity IEP Neighborhood
BP GO:1902551 regulation of catalase activity IEP Neighborhood
BP GO:1902553 positive regulation of catalase activity IEP Neighborhood
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Neighborhood
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1903509 liposaccharide metabolic process IEP Neighborhood
BP GO:1903792 negative regulation of anion transport IEP Neighborhood
BP GO:1903960 negative regulation of anion transmembrane transport IEP Neighborhood
BP GO:1904062 regulation of cation transmembrane transport IEP Neighborhood
MF GO:1904680 peptide transmembrane transporter activity IEP Neighborhood
BP GO:1905392 plant organ morphogenesis IEP Neighborhood
BP GO:2000071 regulation of defense response by callose deposition IEP Neighborhood
BP GO:2000468 regulation of peroxidase activity IEP Neighborhood
BP GO:2000470 positive regulation of peroxidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 299 415
IPR019489 Clp_ATPase_C 817 897
IPR004176 Clp_N 185 236
IPR004176 Clp_N 109 161
IPR003959 ATPase_AAA_core 636 810
No external refs found!