AT1G25550

Description : myb-like transcription factor family protein

Gene families : OG0001192 (Archaeplastida) Phylogenetic Tree(s): OG0001192_tree ,
OG_05_0000884 (LandPlants) Phylogenetic Tree(s): OG_05_0000884_tree ,
OG_06_0000674 (SeedPlants) Phylogenetic Tree(s): OG_06_0000674_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G25550
Cluster	HCCA: Cluster_193

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00033p00241280	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.07	Archaeplastida
AT1G68670	No alias	myb-like transcription factor family protein	0.06	Archaeplastida
LOC_Os02g22020.1	No alias	G2-like GARP transcription factor	0.03	Archaeplastida
Zm00001e003080_P001	No alias	G2-like GARP transcription factor	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006820	anion transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010167	response to nitrate	RCA	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0015698	inorganic anion transport	None	Extended
BP	GO:0015706	nitrate transport	RCA	Interproscan
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000813	ESCRT I complex	IEP	Neighborhood
BP	GO:0002218	activation of innate immune response	IEP	Neighborhood
BP	GO:0002220	innate immune response activating cell surface receptor signaling pathway	IEP	Neighborhood
BP	GO:0002221	pattern recognition receptor signaling pathway	IEP	Neighborhood
BP	GO:0002237	response to molecule of bacterial origin	IEP	Neighborhood
BP	GO:0002238	response to molecule of fungal origin	IEP	Neighborhood
BP	GO:0002252	immune effector process	IEP	Neighborhood
BP	GO:0002253	activation of immune response	IEP	Neighborhood
BP	GO:0002376	immune system process	IEP	Neighborhood
BP	GO:0002429	immune response-activating cell surface receptor signaling pathway	IEP	Neighborhood
BP	GO:0002679	respiratory burst involved in defense response	IEP	Neighborhood
BP	GO:0002684	positive regulation of immune system process	IEP	Neighborhood
BP	GO:0002752	cell surface pattern recognition receptor signaling pathway	IEP	Neighborhood
BP	GO:0002757	immune response-activating signal transduction	IEP	Neighborhood
BP	GO:0002758	innate immune response-activating signal transduction	IEP	Neighborhood
BP	GO:0002764	immune response-regulating signaling pathway	IEP	Neighborhood
BP	GO:0002768	immune response-regulating cell surface receptor signaling pathway	IEP	Neighborhood
MF	GO:0004888	transmembrane signaling receptor activity	IEP	Neighborhood
BP	GO:0006487	protein N-linked glycosylation	IEP	Neighborhood
MF	GO:0008061	chitin binding	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
BP	GO:0009593	detection of chemical stimulus	IEP	Neighborhood
BP	GO:0009595	detection of biotic stimulus	IEP	Neighborhood
BP	GO:0009620	response to fungus	IEP	Neighborhood
BP	GO:0009817	defense response to fungus, incompatible interaction	IEP	Neighborhood
BP	GO:0009873	ethylene-activated signaling pathway	IEP	Neighborhood
BP	GO:0010029	regulation of seed germination	IEP	Neighborhood
BP	GO:0010030	positive regulation of seed germination	IEP	Neighborhood
BP	GO:0010033	response to organic substance	IEP	Neighborhood
BP	GO:0010200	response to chitin	IEP	Neighborhood
BP	GO:0010214	seed coat development	IEP	Neighborhood
BP	GO:0010243	response to organonitrogen compound	IEP	Neighborhood
MF	GO:0016208	AMP binding	IEP	Neighborhood
MF	GO:0016405	CoA-ligase activity	IEP	Neighborhood
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	Neighborhood
MF	GO:0016878	acid-thiol ligase activity	IEP	Neighborhood
BP	GO:0016999	antibiotic metabolic process	IEP	Neighborhood
BP	GO:0017001	antibiotic catabolic process	IEP	Neighborhood
BP	GO:0017144	drug metabolic process	IEP	Neighborhood
MF	GO:0019199	transmembrane receptor protein kinase activity	IEP	Neighborhood
MF	GO:0030246	carbohydrate binding	IEP	Neighborhood
BP	GO:0031349	positive regulation of defense response	IEP	Neighborhood
BP	GO:0032490	detection of molecule of bacterial origin	IEP	Neighborhood
BP	GO:0032491	detection of molecule of fungal origin	IEP	Neighborhood
BP	GO:0032494	response to peptidoglycan	IEP	Neighborhood
BP	GO:0032499	detection of peptidoglycan	IEP	Neighborhood
BP	GO:0033609	oxalate metabolic process	IEP	Neighborhood
BP	GO:0033611	oxalate catabolic process	IEP	Neighborhood
BP	GO:0035556	intracellular signal transduction	IEP	Neighborhood
BP	GO:0035690	cellular response to drug	IEP	Neighborhood
CC	GO:0036452	ESCRT complex	IEP	Neighborhood
MF	GO:0038023	signaling receptor activity	IEP	Neighborhood
BP	GO:0042493	response to drug	IEP	Neighborhood
BP	GO:0042537	benzene-containing compound metabolic process	IEP	Neighborhood
BP	GO:0042744	hydrogen peroxide catabolic process	IEP	Neighborhood
MF	GO:0042803	protein homodimerization activity	IEP	Neighborhood
BP	GO:0043648	dicarboxylic acid metabolic process	IEP	Neighborhood
BP	GO:0043649	dicarboxylic acid catabolic process	IEP	Neighborhood
CC	GO:0044433	cytoplasmic vesicle part	IEP	Neighborhood
CC	GO:0044440	endosomal part	IEP	Neighborhood
BP	GO:0045089	positive regulation of innate immune response	IEP	Neighborhood
BP	GO:0045730	respiratory burst	IEP	Neighborhood
BP	GO:0046482	para-aminobenzoic acid metabolic process	IEP	Neighborhood
BP	GO:0048518	positive regulation of biological process	IEP	Neighborhood
BP	GO:0048523	negative regulation of cellular process	IEP	Neighborhood
BP	GO:0048582	positive regulation of post-embryonic development	IEP	Neighborhood
BP	GO:0048584	positive regulation of response to stimulus	IEP	Neighborhood
MF	GO:0050203	oxalate-CoA ligase activity	IEP	Neighborhood
BP	GO:0050778	positive regulation of immune response	IEP	Neighborhood
BP	GO:0050832	defense response to fungus	IEP	Neighborhood
BP	GO:0051094	positive regulation of developmental process	IEP	Neighborhood
BP	GO:0051240	positive regulation of multicellular organismal process	IEP	Neighborhood
MF	GO:0070405	ammonium ion binding	IEP	Neighborhood
BP	GO:0071216	cellular response to biotic stimulus	IEP	Neighborhood
BP	GO:0071219	cellular response to molecule of bacterial origin	IEP	Neighborhood
BP	GO:0071310	cellular response to organic substance	IEP	Neighborhood
BP	GO:0071323	cellular response to chitin	IEP	Neighborhood
BP	GO:0071417	cellular response to organonitrogen compound	IEP	Neighborhood
BP	GO:0071495	cellular response to endogenous stimulus	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
BP	GO:0098581	detection of external biotic stimulus	IEP	Neighborhood
BP	GO:1900140	regulation of seedling development	IEP	Neighborhood
BP	GO:1901699	cellular response to nitrogen compound	IEP	Neighborhood
MF	GO:2001080	chitosan binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	211	262

External Links

No external refs found!

AT1G25550

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation