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  5. MA_502016g0010

MA_502016g0010


Description : MADS-box protein GGM13 OS=Gnetum gnemon (sp|q9xgj4|ggm13_gnegn : 188.0)


Gene families : OG0000011 (Archaeplastida) Phylogenetic Tree(s): OG0000011_tree ,
OG_05_0000008 (LandPlants) Phylogenetic Tree(s): OG_05_0000008_tree ,
OG_06_0000013 (SeedPlants) Phylogenetic Tree(s): OG_06_0000013_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_502016g0010
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AT2G22630 AGL17 AGAMOUS-like 17 0.04 Archaeplastida
AT2G42830 SHP2, AGL5 K-box region and MADS-box transcription factor family protein 0.02 Archaeplastida
AT3G04100 AGL57 AGAMOUS-like 57 0.02 Archaeplastida
AT3G54340 AP3, ATAP3 K-box region and MADS-box transcription factor family protein 0.01 Archaeplastida
AT3G66656 AGL91 AGAMOUS-like 91 0.01 Archaeplastida
AT4G11880 AGL14 AGAMOUS-like 14 0.03 Archaeplastida
AT4G18960 AG K-box region and MADS-box transcription factor family protein 0.01 Archaeplastida
AT5G20240 PI K-box region and MADS-box transcription factor family protein 0.02 Archaeplastida
GSVIVT01008139001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
GSVIVT01008806001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
GSVIVT01012110001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.01 Archaeplastida
GSVIVT01021534001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
GSVIVT01025945001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.01 Archaeplastida
GSVIVT01026207001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.01 Archaeplastida
GSVIVT01035477001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.01 Archaeplastida
Gb_03068 No alias transcription factor (MADS/AGL) 0.01 Archaeplastida
LOC_Os03g54160.1 No alias transcription factor (MADS/AGL) 0.09 Archaeplastida
LOC_Os06g23980.1 No alias MADS-box transcription factor 27 OS=Oryza sativa subsp.... 0.02 Archaeplastida
MA_10434339g0010 No alias MADS-box protein GGM13 OS=Gnetum gnemon... 0.01 Archaeplastida
MA_32676g0010 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
MA_629987g0010 No alias MADS-box protein GGM13 OS=Gnetum gnemon... 0.01 Archaeplastida
MA_63212g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_8748850g0010 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Solyc02g089210.4.1 No alias transcription factor (MADS/AGL) 0.05 Archaeplastida
Solyc04g081000.3.1 No alias transcription factor (MADS/AGL) 0.01 Archaeplastida
Solyc06g059970.4.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Solyc08g067230.4.1 No alias No annotation 0.02 Archaeplastida
Solyc11g032100.2.1 No alias transcription factor (MADS/AGL) 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
InterPro domains Description Start Stop
IPR002487 TF_Kbox 20 103
No external refs found!