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Description : RING-HC-class E3 ligase
Gene families : OG0001773 (Archaeplastida) Phylogenetic Tree(s): OG0001773_tree ,
OG_05_0026094 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0024438 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_592562g0010 | |
| Cluster | HCCA: Cluster_533 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Gb_15023 | No alias | RING-HC-class E3 ligase | 0.02 | Archaeplastida | |
| Gb_28646 | No alias | RING-HC-class E3 ligase | 0.02 | Archaeplastida | |
| LOC_Os10g41590.1 | No alias | RING-HC-class E3 ligase | 0.02 | Archaeplastida | |
| Mp6g03540.1 | No alias | RING-HC-class E3 ligase | 0.02 | Archaeplastida | |
| Pp3c16_2030V3.1 | No alias | histone mono-ubiquitination 1 | 0.03 | Archaeplastida | |
| Smo175555 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | Archaeplastida | |
| Zm00001e013143_P005 | No alias | RING-HC-class E3 ligase | 0.05 | Archaeplastida | |
| Zm00001e030249_P002 | No alias | RING-HC-class E3 ligase | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003682 | chromatin binding | IEP | Neighborhood |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Neighborhood |
| MF | GO:0003918 | DNA topoisomerase type II (ATP-hydrolyzing) activity | IEP | Neighborhood |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| BP | GO:0006265 | DNA topological change | IEP | Neighborhood |
| BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
| BP | GO:0006996 | organelle organization | IEP | Neighborhood |
| MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Neighborhood |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Neighborhood |
| BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
| BP | GO:0016311 | dephosphorylation | IEP | Neighborhood |
| MF | GO:0016791 | phosphatase activity | IEP | Neighborhood |
| CC | GO:0030684 | preribosome | IEP | Neighborhood |
| CC | GO:0032040 | small-subunit processome | IEP | Neighborhood |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | Neighborhood |
| BP | GO:0051276 | chromosome organization | IEP | Neighborhood |
| MF | GO:0061505 | DNA topoisomerase II activity | IEP | Neighborhood |
| BP | GO:0071103 | DNA conformation change | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |