AT5G58050 (SVL4)

Aliases : SVL4

Description : SHV3-like 4

Gene families : OG0001385 (Archaeplastida) Phylogenetic Tree(s): OG0001385_tree ,
OG_05_0000896 (LandPlants) Phylogenetic Tree(s): OG_05_0000896_tree ,
OG_06_0001220 (SeedPlants) Phylogenetic Tree(s): OG_06_0001220_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G58050
Cluster	HCCA: Cluster_231

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00055p00174750	evm_27.TU.AmTr_v1...	Glycerophosphodiester phosphodiesterase GDPDL3...	0.03	Archaeplastida
AMTR_s00252p00015420	evm_27.TU.AmTr_v1...	Glycerophosphodiester phosphodiesterase GDPDL6...	0.15	Archaeplastida
AT4G26690	GPDL2, SHV3, MRH5	PLC-like phosphodiesterase family protein	0.06	Archaeplastida
GSVIVT01003731001	No alias	Glycerophosphodiester phosphodiesterase GDPDL6...	0.1	Archaeplastida
Gb_10598	No alias	Glycerophosphodiester phosphodiesterase GDPDL4...	0.03	Archaeplastida
LOC_Os02g09450.1	No alias	Glycerophosphodiester phosphodiesterase GDPDL7...	0.09	Archaeplastida
MA_10434415g0020	No alias	Protein SUPPRESSOR OF NPR1-1 CONSTITUTIVE 4...	0.04	Archaeplastida
Mp8g07940.1	No alias	Glycerophosphodiester phosphodiesterase GDPDL7...	0.06	Archaeplastida
Pp3c1_13780V3.1	No alias	SHV3-like 4	0.02	Archaeplastida
Pp3c2_26540V3.1	No alias	SHV3-like 5	0.02	Archaeplastida
Pp3c2_28200V3.1	No alias	PLC-like phosphodiesterase family protein	0.09	Archaeplastida
Solyc02g014490.4.1	No alias	Glycerophosphodiester phosphodiesterase GDPDL7...	0.17	Archaeplastida
Solyc02g014530.4.1	No alias	Glycerophosphodiester phosphodiesterase GDPDL6...	0.12	Archaeplastida
Solyc07g065120.3.1	No alias	Glycerophosphodiester phosphodiesterase GDPDL4...	0.04	Archaeplastida
Zm00001e014970_P001	No alias	Glycerophosphodiester phosphodiesterase GDPDL3...	0.03	Archaeplastida
Zm00001e025069_P001	No alias	Glycerophosphodiester phosphodiesterase GDPDL7...	0.07	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0006066	alcohol metabolic process	None	Extended
BP	GO:0006071	glycerol metabolic process	ISS	Interproscan
MF	GO:0008081	phosphoric diester hydrolase activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008889	glycerophosphodiester phosphodiesterase activity	ISS	Interproscan
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
MF	GO:0016301	kinase activity	ISS	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
BP	GO:0019400	alditol metabolic process	None	Extended
BP	GO:0019751	polyol metabolic process	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0031225	anchored component of membrane	TAS	Interproscan
MF	GO:0042578	phosphoric ester hydrolase activity	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044464	cell part	None	Extended
CC	GO:0048046	apoplast	IDA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	IEP	Neighborhood
BP	GO:0000904	cell morphogenesis involved in differentiation	IEP	Neighborhood
BP	GO:0001558	regulation of cell growth	IEP	Neighborhood
BP	GO:0003006	developmental process involved in reproduction	IEP	Neighborhood
MF	GO:0004439	phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004565	beta-galactosidase activity	IEP	Neighborhood
MF	GO:0004650	polygalacturonase activity	IEP	Neighborhood
MF	GO:0004857	enzyme inhibitor activity	IEP	Neighborhood
MF	GO:0005088	Ras guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005089	Rho guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005199	structural constituent of cell wall	IEP	Neighborhood
MF	GO:0005242	inward rectifier potassium channel activity	IEP	Neighborhood
MF	GO:0005319	lipid transporter activity	IEP	Neighborhood
MF	GO:0005388	calcium-transporting ATPase activity	IEP	Neighborhood
MF	GO:0005548	phospholipid transporter activity	IEP	Neighborhood
CC	GO:0005618	cell wall	IEP	Neighborhood
CC	GO:0005794	Golgi apparatus	IEP	Neighborhood
BP	GO:0006882	cellular zinc ion homeostasis	IEP	Neighborhood
BP	GO:0006928	movement of cell or subcellular component	IEP	Neighborhood
BP	GO:0007338	single fertilization	IEP	Neighborhood
MF	GO:0008526	phosphatidylinositol transporter activity	IEP	Neighborhood
MF	GO:0009044	xylan 1,4-beta-xylosidase activity	IEP	Neighborhood
MF	GO:0009055	electron transfer activity	IEP	Neighborhood
CC	GO:0009505	plant-type cell wall	IEP	Neighborhood
BP	GO:0009653	anatomical structure morphogenesis	IEP	Neighborhood
BP	GO:0009664	plant-type cell wall organization	IEP	Neighborhood
BP	GO:0009826	unidimensional cell growth	IEP	Neighborhood
BP	GO:0009827	plant-type cell wall modification	IEP	Neighborhood
BP	GO:0009832	plant-type cell wall biogenesis	IEP	Neighborhood
BP	GO:0009846	pollen germination	IEP	Neighborhood
BP	GO:0009860	pollen tube growth	IEP	Neighborhood
BP	GO:0009932	cell tip growth	IEP	Neighborhood
BP	GO:0010769	regulation of cell morphogenesis involved in differentiation	IEP	Neighborhood
BP	GO:0016043	cellular component organization	IEP	Neighborhood
BP	GO:0016049	cell growth	IEP	Neighborhood
MF	GO:0016759	cellulose synthase activity	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
MF	GO:0017048	Rho GTPase binding	IEP	Neighborhood
BP	GO:0022414	reproductive process	IEP	Neighborhood
BP	GO:0022603	regulation of anatomical structure morphogenesis	IEP	Neighborhood
BP	GO:0022604	regulation of cell morphogenesis	IEP	Neighborhood
BP	GO:0030029	actin filament-based process	IEP	Neighborhood
BP	GO:0030048	actin filament-based movement	IEP	Neighborhood
MF	GO:0030234	enzyme regulator activity	IEP	Neighborhood
CC	GO:0030312	external encapsulating structure	IEP	Neighborhood
MF	GO:0030599	pectinesterase activity	IEP	Neighborhood
CC	GO:0031012	extracellular matrix	IEP	Neighborhood
BP	GO:0032502	developmental process	IEP	Neighborhood
BP	GO:0032989	cellular component morphogenesis	IEP	Neighborhood
MF	GO:0034485	phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	IEP	Neighborhood
MF	GO:0034593	phosphatidylinositol bisphosphate phosphatase activity	IEP	Neighborhood
MF	GO:0034594	phosphatidylinositol trisphosphate phosphatase activity	IEP	Neighborhood
MF	GO:0034595	phosphatidylinositol phosphate 5-phosphatase activity	IEP	Neighborhood
BP	GO:0040007	growth	IEP	Neighborhood
BP	GO:0040008	regulation of growth	IEP	Neighborhood
BP	GO:0042545	cell wall modification	IEP	Neighborhood
CC	GO:0042995	cell projection	IEP	Neighborhood
BP	GO:0045229	external encapsulating structure organization	IEP	Neighborhood
MF	GO:0046030	inositol trisphosphate phosphatase activity	IEP	Neighborhood
MF	GO:0046527	glucosyltransferase activity	IEP	Neighborhood
MF	GO:0046910	pectinesterase inhibitor activity	IEP	Neighborhood
BP	GO:0048588	developmental cell growth	IEP	Neighborhood
BP	GO:0048589	developmental growth	IEP	Neighborhood
BP	GO:0048638	regulation of developmental growth	IEP	Neighborhood
BP	GO:0048868	pollen tube development	IEP	Neighborhood
BP	GO:0048869	cellular developmental process	IEP	Neighborhood
MF	GO:0050378	UDP-glucuronate 4-epimerase activity	IEP	Neighborhood
BP	GO:0051128	regulation of cellular component organization	IEP	Neighborhood
BP	GO:0051510	regulation of unidimensional cell growth	IEP	Neighborhood
MF	GO:0052658	inositol-1,4,5-trisphosphate 5-phosphatase activity	IEP	Neighborhood
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Neighborhood
MF	GO:0052745	inositol phosphate phosphatase activity	IEP	Neighborhood
MF	GO:0052866	phosphatidylinositol phosphate phosphatase activity	IEP	Neighborhood
BP	GO:0060284	regulation of cell development	IEP	Neighborhood
BP	GO:0060560	developmental growth involved in morphogenesis	IEP	Neighborhood
BP	GO:0071554	cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0071555	cell wall organization	IEP	Neighborhood
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0071840	cellular component organization or biogenesis	IEP	Neighborhood
BP	GO:0080092	regulation of pollen tube growth	IEP	Neighborhood
CC	GO:0090406	pollen tube	IEP	Neighborhood
MF	GO:0097599	xylanase activity	IEP	Neighborhood
MF	GO:0098772	molecular function regulator	IEP	Neighborhood
MF	GO:0099094	ligand-gated cation channel activity	IEP	Neighborhood
MF	GO:0106019	phosphatidylinositol-4,5-bisphosphate phosphatase activity	IEP	Neighborhood
CC	GO:0120025	plasma membrane bounded cell projection	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR030395	GP_PDE_dom	360	649
IPR030395	GP_PDE_dom	77	332

External Links

No external refs found!

AT5G58050 (SVL4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation