AT5G60200 (TMO6)

Aliases : TMO6

Description : TARGET OF MONOPTEROS 6

Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0000055 (SeedPlants) Phylogenetic Tree(s): OG_06_0000055_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G60200
Cluster	HCCA: Cluster_165

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00248860	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
AMTR_s00010p00264070	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.06	Archaeplastida
AMTR_s00012p00176640	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.09	Archaeplastida
AMTR_s00021p00057700	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
AMTR_s00033p00212490	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
AMTR_s00059p00213350	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.05	Archaeplastida
AMTR_s00069p00049300	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
AT1G29160	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Archaeplastida
AT2G28810	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Archaeplastida
AT2G46590	DAG2	Dof-type zinc finger DNA-binding family protein	0.04	Archaeplastida
GSVIVT01002242001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
GSVIVT01005057001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.06	Archaeplastida
GSVIVT01021085001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
GSVIVT01021086001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
GSVIVT01021212001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
GSVIVT01024986001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.07	Archaeplastida
GSVIVT01038591001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
Gb_20144	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os01g09720.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os01g15900.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os01g17000.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
LOC_Os02g15350.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os02g45200.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os02g47810.1	No alias	transcription factor (DOF)	0.05	Archaeplastida
LOC_Os03g55610.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os03g60630.1	No alias	transcription factor (DOF)	0.06	Archaeplastida
LOC_Os04g47990.1	No alias	transcription factor (DOF)	0.05	Archaeplastida
LOC_Os04g58190.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os05g02150.1	No alias	transcription factor (DOF)	0.07	Archaeplastida
LOC_Os07g32510.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os10g26620.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os12g38200.1	No alias	transcription factor (DOF)	0.05	Archaeplastida
MA_123810g0010	No alias	transcription factor (DOF)	0.02	Archaeplastida
MA_16692g0010	No alias	transcription factor (DOF)	0.04	Archaeplastida
MA_18267g0010	No alias	transcription factor (DOF)	0.03	Archaeplastida
MA_2430g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_248613g0010	No alias	No annotation	0.03	Archaeplastida
MA_459791g0010	No alias	transcription factor (DOF)	0.03	Archaeplastida
MA_74014g0010	No alias	transcription factor (DOF)	0.03	Archaeplastida
MA_7537g0010	No alias	transcription factor (DOF)	0.03	Archaeplastida
MA_83624g0010	No alias	transcription factor (DOF)	0.02	Archaeplastida
Mp1g18540.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Mp2g20790.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
Pp3c13_2000V3.1	No alias	cycling DOF factor 3	0.03	Archaeplastida
Pp3c17_3860V3.1	No alias	OBF binding protein 4	0.03	Archaeplastida
Pp3c9_4910V3.1	No alias	cycling DOF factor 2	0.04	Archaeplastida
Solyc02g077950.3.1	No alias	transcription factor (DOF)	0.07	Archaeplastida
Solyc02g077960.3.1	No alias	transcription factor (DOF)	0.06	Archaeplastida
Solyc02g078620.1.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Solyc02g090220.3.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Solyc03g082840.3.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Solyc03g112930.3.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Solyc03g121400.1.1	No alias	transcription factor (DOF)	0.06	Archaeplastida
Solyc06g075370.3.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
Solyc06g076030.3.1	No alias	transcription factor (DOF)	0.05	Archaeplastida
Solyc09g010680.3.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
Solyc10g009360.4.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e000526_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e002951_P002	No alias	transcription factor (DOF)	0.07	Archaeplastida
Zm00001e003086_P001	No alias	transcription factor (DOF)	0.02	Archaeplastida
Zm00001e004476_P002	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e005107_P001	No alias	transcription factor (DOF)	0.05	Archaeplastida
Zm00001e005785_P001	No alias	transcription factor (DOF)	0.06	Archaeplastida
Zm00001e006190_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e007228_P002	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e010022_P001	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e010454_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e011750_P002	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e015414_P004	No alias	transcription factor (DOF)	0.05	Archaeplastida
Zm00001e015597_P001	No alias	transcription factor (DOF)	0.05	Archaeplastida
Zm00001e018163_P001	No alias	transcription factor (DOF)	0.05	Archaeplastida
Zm00001e019172_P001	No alias	transcription factor (DOF)	0.07	Archaeplastida
Zm00001e020190_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e023218_P004	No alias	transcription factor (DOF)	0.05	Archaeplastida
Zm00001e023334_P001	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e027411_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e027634_P002	No alias	transcription factor (DOF)	0.06	Archaeplastida
Zm00001e028042_P002	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e028672_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e035074_P001	No alias	transcription factor (DOF)	0.06	Archaeplastida
Zm00001e041444_P001	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e041944_P001	No alias	transcription factor (DOF)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009799	specification of symmetry	None	Extended
BP	GO:0009855	determination of bilateral symmetry	RCA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009944	polarity specification of adaxial/abaxial axis	RCA	Interproscan
BP	GO:0010014	meristem initiation	RCA	Interproscan
BP	GO:0010075	regulation of meristem growth	RCA	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0048364	root development	IEP	Interproscan
BP	GO:0048509	regulation of meristem development	None	Extended
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065001	specification of axis polarity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0099402	plant organ development	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	IEP	Neighborhood
BP	GO:0000904	cell morphogenesis involved in differentiation	IEP	Neighborhood
MF	GO:0003756	protein disulfide isomerase activity	IEP	Neighborhood
CC	GO:0005770	late endosome	IEP	Neighborhood
CC	GO:0005886	plasma membrane	IEP	Neighborhood
BP	GO:0007275	multicellular organism development	IEP	Neighborhood
MF	GO:0008172	S-methyltransferase activity	IEP	Neighborhood
BP	GO:0008300	isoprenoid catabolic process	IEP	Neighborhood
BP	GO:0008361	regulation of cell size	IEP	Neighborhood
MF	GO:0008898	S-adenosylmethionine-homocysteine S-methyltransferase activity	IEP	Neighborhood
BP	GO:0009806	lignan metabolic process	IEP	Neighborhood
BP	GO:0009807	lignan biosynthetic process	IEP	Neighborhood
BP	GO:0009914	hormone transport	IEP	Neighborhood
BP	GO:0009926	auxin polar transport	IEP	Neighborhood
BP	GO:0009956	radial pattern formation	IEP	Neighborhood
CC	GO:0009986	cell surface	IEP	Neighborhood
BP	GO:0010051	xylem and phloem pattern formation	IEP	Neighborhood
BP	GO:0010088	phloem development	IEP	Neighborhood
BP	GO:0010090	trichome morphogenesis	IEP	Neighborhood
BP	GO:0010229	inflorescence development	IEP	Neighborhood
BP	GO:0010232	vascular transport	IEP	Neighborhood
BP	GO:0010233	phloem transport	IEP	Neighborhood
BP	GO:0010492	maintenance of shoot apical meristem identity	IEP	Neighborhood
BP	GO:0010540	basipetal auxin transport	IEP	Neighborhood
BP	GO:0010588	cotyledon vascular tissue pattern formation	IEP	Neighborhood
CC	GO:0015630	microtubule cytoskeleton	IEP	Neighborhood
BP	GO:0016103	diterpenoid catabolic process	IEP	Neighborhood
BP	GO:0016115	terpenoid catabolic process	IEP	Neighborhood
CC	GO:0016324	apical plasma membrane	IEP	Neighborhood
MF	GO:0016864	intramolecular oxidoreductase activity, transposing S-S bonds	IEP	Neighborhood
BP	GO:0022622	root system development	IEP	Neighborhood
BP	GO:0032535	regulation of cellular component size	IEP	Neighborhood
BP	GO:0032989	cellular component morphogenesis	IEP	Neighborhood
BP	GO:0042447	hormone catabolic process	IEP	Neighborhood
BP	GO:0045176	apical protein localization	IEP	Neighborhood
BP	GO:0045487	gibberellin catabolic process	IEP	Neighborhood
MF	GO:0045543	gibberellin 2-beta-dioxygenase activity	IEP	Neighborhood
BP	GO:0048766	root hair initiation	IEP	Neighborhood
BP	GO:0048768	root hair cell tip growth	IEP	Neighborhood
BP	GO:0048825	cotyledon development	IEP	Neighborhood
MF	GO:0052634	C-19 gibberellin 2-beta-dioxygenase activity	IEP	Neighborhood
BP	GO:0060918	auxin transport	IEP	Neighborhood
BP	GO:0090066	regulation of anatomical structure size	IEP	Neighborhood
CC	GO:0098590	plasma membrane region	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	55	109

External Links

No external refs found!

AT5G60200 (TMO6)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation