AT1G26820 (RNS3)


Aliases : RNS3

Description : ribonuclease 3


Gene families : OG0000815 (Archaeplastida) Phylogenetic Tree(s): OG0000815_tree ,
OG_05_0002179 (LandPlants) Phylogenetic Tree(s): OG_05_0002179_tree ,
OG_06_0002586 (SeedPlants) Phylogenetic Tree(s): OG_06_0002586_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G26820
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Gb_01128 No alias Extracellular ribonuclease LE OS=Solanum lycopersicum... 0.03 Archaeplastida
Gb_30835 No alias Ribonuclease 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_30836 No alias Ribonuclease 1 OS=Arabidopsis thaliana... 0.07 Archaeplastida
LOC_Os07g43670.1 No alias Ribonuclease 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os08g33710.1 No alias Extracellular ribonuclease LE OS=Solanum lycopersicum... 0.05 Archaeplastida
MA_10433186g0010 No alias Ribonuclease 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_4032367g0010 No alias Ribonuclease 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_8445917g0010 No alias Ribonuclease 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_9272140g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_95383g0020 No alias Ribonuclease 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Smo270532 No alias Extracellular ribonuclease LE OS=Solanum lycopersicum 0.02 Archaeplastida
Solyc05g007940.3.1 No alias Intracellular ribonuclease LX OS=Solanum lycopersicum... 0.1 Archaeplastida
Solyc05g007950.4.1 No alias Extracellular ribonuclease LE OS=Solanum lycopersicum... 0.04 Archaeplastida
Zm00001e004122_P001 No alias Ribonuclease 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004521 endoribonuclease activity ISS Interproscan
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0007568 aging IEP Interproscan
Type GO Term Name Evidence Source
MF GO:0000014 single-stranded DNA endodeoxyribonuclease activity IEP Neighborhood
CC GO:0000323 lytic vacuole IEP Neighborhood
BP GO:0003333 amino acid transmembrane transport IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004520 endodeoxyribonuclease activity IEP Neighborhood
MF GO:0004536 deoxyribonuclease activity IEP Neighborhood
MF GO:0004805 trehalose-phosphatase activity IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006308 DNA catabolic process IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006638 neutral lipid metabolic process IEP Neighborhood
BP GO:0006639 acylglycerol metabolic process IEP Neighborhood
BP GO:0006970 response to osmotic stress IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0008506 sucrose:proton symporter activity IEP Neighborhood
MF GO:0008515 sucrose transmembrane transporter activity IEP Neighborhood
MF GO:0008970 phospholipase A1 activity IEP Neighborhood
BP GO:0009556 microsporogenesis IEP Neighborhood
BP GO:0009651 response to salt stress IEP Neighborhood
MF GO:0009669 sucrose:cation symporter activity IEP Neighborhood
BP GO:0009698 phenylpropanoid metabolic process IEP Neighborhood
BP GO:0009699 phenylpropanoid biosynthetic process IEP Neighborhood
CC GO:0009705 plant-type vacuole membrane IEP Neighborhood
BP GO:0009751 response to salicylic acid IEP Neighborhood
BP GO:0010150 leaf senescence IEP Neighborhood
BP GO:0010187 negative regulation of seed germination IEP Neighborhood
BP GO:0010252 auxin homeostasis IEP Neighborhood
MF GO:0010279 indole-3-acetic acid amido synthetase activity IEP Neighborhood
CC GO:0010282 senescence-associated vacuole IEP Neighborhood
BP GO:0010345 suberin biosynthetic process IEP Neighborhood
MF GO:0010436 carotenoid dioxygenase activity IEP Neighborhood
MF GO:0015154 disaccharide transmembrane transporter activity IEP Neighborhood
MF GO:0015157 oligosaccharide transmembrane transporter activity IEP Neighborhood
MF GO:0015179 L-amino acid transmembrane transporter activity IEP Neighborhood
MF GO:0015562 efflux transmembrane transporter activity IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016881 acid-amino acid ligase activity IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0032973 amino acid export across plasma membrane IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
BP GO:0034293 sexual sporulation IEP Neighborhood
MF GO:0034639 L-amino acid efflux transmembrane transporter activity IEP Neighborhood
MF GO:0043765 T/G mismatch-specific endonuclease activity IEP Neighborhood
BP GO:0043934 sporulation IEP Neighborhood
BP GO:0044550 secondary metabolite biosynthetic process IEP Neighborhood
MF GO:0045549 9-cis-epoxycarotenoid dioxygenase activity IEP Neighborhood
BP GO:0046339 diacylglycerol metabolic process IEP Neighborhood
BP GO:0046340 diacylglycerol catabolic process IEP Neighborhood
BP GO:0046461 neutral lipid catabolic process IEP Neighborhood
BP GO:0046462 monoacylglycerol metabolic process IEP Neighborhood
BP GO:0046464 acylglycerol catabolic process IEP Neighborhood
BP GO:0046503 glycerolipid catabolic process IEP Neighborhood
BP GO:0046688 response to copper ion IEP Neighborhood
MF GO:0047372 acylglycerol lipase activity IEP Neighborhood
BP GO:0048236 plant-type sporogenesis IEP Neighborhood
MF GO:0050062 long-chain-fatty-acyl-CoA reductase activity IEP Neighborhood
BP GO:0051321 meiotic cell cycle IEP Neighborhood
BP GO:0052651 monoacylglycerol catabolic process IEP Neighborhood
BP GO:0055081 anion homeostasis IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0080144 amino acid homeostasis IEP Neighborhood
BP GO:0080187 floral organ senescence IEP Neighborhood
BP GO:0090693 plant organ senescence IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:0140115 export across plasma membrane IEP Neighborhood
BP GO:1903338 regulation of cell wall organization or biogenesis IEP Neighborhood
BP GO:1903825 organic acid transmembrane transport IEP Neighborhood
BP GO:1905039 carboxylic acid transmembrane transport IEP Neighborhood
BP GO:2000652 regulation of secondary cell wall biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR001568 RNase_T2-like 22 205
No external refs found!