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Description : PAP5/TAC12 cofactor of plastid-encoded RNA polymerase. transcriptional coactivator (HEMERA)
Gene families : OG0007706 (Archaeplastida) Phylogenetic Tree(s): OG0007706_tree ,
OG_05_0007174 (LandPlants) Phylogenetic Tree(s): OG_05_0007174_tree ,
OG_06_0007904 (SeedPlants) Phylogenetic Tree(s): OG_06_0007904_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_8815984g0010 | |
| Cluster | HCCA: Cluster_269 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G34640 | PTAC12, HMR | plastid transcriptionally active 12 | 0.05 | Archaeplastida | |
| GSVIVT01021555001 | No alias | RNA biosynthesis.organelle machineries.RNA polymerase... | 0.05 | Archaeplastida | |
| Gb_08037 | No alias | PAP5/TAC12 cofactor of plastid-encoded RNA polymerase.... | 0.05 | Archaeplastida | |
| LOC_Os01g56350.3 | No alias | PAP5/TAC12 cofactor of plastid-encoded RNA polymerase.... | 0.07 | Archaeplastida | |
| Mp1g24680.1 | No alias | PAP5/TAC12 cofactor of plastid-encoded RNA polymerase.... | 0.06 | Archaeplastida | |
| Pp3c3_26950V3.1 | No alias | plastid transcriptionally active 12 | 0.06 | Archaeplastida | |
| Solyc02g070390.3.1 | No alias | PAP5/TAC12 cofactor of plastid-encoded RNA polymerase.... | 0.02 | Archaeplastida | |
| Zm00001e019697_P001 | No alias | PAP5/TAC12 cofactor of plastid-encoded RNA polymerase.... | 0.06 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000774 | adenyl-nucleotide exchange factor activity | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003690 | double-stranded DNA binding | IEP | Neighborhood |
| MF | GO:0003746 | translation elongation factor activity | IEP | Neighborhood |
| MF | GO:0004325 | ferrochelatase activity | IEP | Neighborhood |
| MF | GO:0004425 | indole-3-glycerol-phosphate synthase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Neighborhood |
| BP | GO:0006414 | translational elongation | IEP | Neighborhood |
| BP | GO:0006457 | protein folding | IEP | Neighborhood |
| BP | GO:0006605 | protein targeting | IEP | Neighborhood |
| BP | GO:0006612 | protein targeting to membrane | IEP | Neighborhood |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Neighborhood |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Neighborhood |
| BP | GO:0006766 | vitamin metabolic process | IEP | Neighborhood |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Neighborhood |
| BP | GO:0006771 | riboflavin metabolic process | IEP | Neighborhood |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0006783 | heme biosynthetic process | IEP | Neighborhood |
| BP | GO:0008104 | protein localization | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| MF | GO:0008686 | 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | IEP | Neighborhood |
| BP | GO:0009058 | biosynthetic process | IEP | Neighborhood |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | Neighborhood |
| BP | GO:0009231 | riboflavin biosynthetic process | IEP | Neighborhood |
| BP | GO:0015031 | protein transport | IEP | Neighborhood |
| MF | GO:0015035 | protein disulfide oxidoreductase activity | IEP | Neighborhood |
| MF | GO:0015036 | disulfide oxidoreductase activity | IEP | Neighborhood |
| BP | GO:0015833 | peptide transport | IEP | Neighborhood |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Neighborhood |
| MF | GO:0016829 | lyase activity | IEP | Neighborhood |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | Neighborhood |
| MF | GO:0016874 | ligase activity | IEP | Neighborhood |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Neighborhood |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Neighborhood |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Neighborhood |
| BP | GO:0033036 | macromolecule localization | IEP | Neighborhood |
| BP | GO:0033365 | protein localization to organelle | IEP | Neighborhood |
| BP | GO:0034613 | cellular protein localization | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0042168 | heme metabolic process | IEP | Neighborhood |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Neighborhood |
| BP | GO:0042440 | pigment metabolic process | IEP | Neighborhood |
| BP | GO:0042726 | flavin-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | Neighborhood |
| MF | GO:0042802 | identical protein binding | IEP | Neighborhood |
| MF | GO:0042803 | protein homodimerization activity | IEP | Neighborhood |
| BP | GO:0042886 | amide transport | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0045047 | protein targeting to ER | IEP | Neighborhood |
| BP | GO:0045184 | establishment of protein localization | IEP | Neighborhood |
| BP | GO:0046148 | pigment biosynthetic process | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| MF | GO:0051087 | chaperone binding | IEP | Neighborhood |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Neighborhood |
| MF | GO:0060590 | ATPase regulator activity | IEP | Neighborhood |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Neighborhood |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | Neighborhood |
| BP | GO:0071702 | organic substance transport | IEP | Neighborhood |
| BP | GO:0071705 | nitrogen compound transport | IEP | Neighborhood |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | Neighborhood |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | Neighborhood |
| BP | GO:0072657 | protein localization to membrane | IEP | Neighborhood |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |