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  5. AMTR_s00001p00182400

AMTR_s00001p00182400 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.176

Description : Multi-process regulation.Rop GTPase regulatory system.RopGEF guanine nucleotide exchange activities.PRONE-type exchange factor


Gene families : OG0000251 (Archaeplastida) Phylogenetic Tree(s): OG0000251_tree ,
OG_05_0000833 (LandPlants) Phylogenetic Tree(s): OG_05_0000833_tree ,
OG_06_0001817 (SeedPlants) Phylogenetic Tree(s): OG_06_0001817_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00182400
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AT1G31650 ROPGEF14, ATROPGEF14 RHO guanyl-nucleotide exchange factor 14 0.04 Archaeplastida
AT2G45890 ATROPGEF4, RHS11, ROPGEF4 RHO guanyl-nucleotide exchange factor 4 0.04 Archaeplastida
AT4G38430 ATROPGEF1, ROPGEF1 rho guanyl-nucleotide exchange factor 1 0.03 Archaeplastida
AT5G02010 ROPGEF7, ATROPGEF7 RHO guanyl-nucleotide exchange factor 7 0.05 Archaeplastida
AT5G05940 ATROPGEF5, ROPGEF5 ROP guanine nucleotide exchange factor 5 0.04 Archaeplastida
GSVIVT01017070001 No alias Multi-process regulation.Rop GTPase regulatory... 0.02 Archaeplastida
GSVIVT01023897001 No alias Multi-process regulation.Rop GTPase regulatory... 0.04 Archaeplastida
Gb_14425 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.06 Archaeplastida
Gb_24552 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.04 Archaeplastida
LOC_Os01g62990.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.02 Archaeplastida
LOC_Os02g47420.3 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.05 Archaeplastida
LOC_Os04g47170.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.09 Archaeplastida
LOC_Os09g37270.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.05 Archaeplastida
LOC_Os10g40270.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.03 Archaeplastida
MA_106710g0030 No alias Cytochrome P450 94C1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_2791g0010 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.04 Archaeplastida
MA_66695g0010 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.02 Archaeplastida
MA_79976g0010 No alias Rho guanine nucleotide exchange factor 8 OS=Arabidopsis... 0.03 Archaeplastida
Pp3c2_4460V3.1 No alias RHO guanyl-nucleotide exchange factor 7 0.02 Archaeplastida
Solyc01g111930.4.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.04 Archaeplastida
Solyc10g086660.2.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.02 Archaeplastida
Zm00001e010284_P002 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.06 Archaeplastida
Zm00001e015569_P002 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.08 Archaeplastida
Zm00001e034952_P003 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.06 Archaeplastida
Zm00001e034978_P001 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
BP GO:0030259 lipid glycosylation IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005512 PRONE_dom 101 476
No external refs found!