AMTR_s00001p00271850 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.499

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000175 (LandPlants) Phylogenetic Tree(s): OG_05_0000175_tree ,
OG_06_0000116 (SeedPlants) Phylogenetic Tree(s): OG_06_0000116_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00271850
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00185200 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AMTR_s00129p00065710 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AT1G24580 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT1G33480 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT1G49230 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT1G67856 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT2G17450 RHA3A RING-H2 finger A3A 0.03 Archaeplastida
AT2G17730 NIP2 NEP-interacting protein 2 0.02 Archaeplastida
AT2G35910 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT2G42350 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G05200 ATL6 RING/U-box superfamily protein 0.03 Archaeplastida
AT3G16720 ATL2, TL2 TOXICOS EN LEVADURA 2 0.03 Archaeplastida
AT3G43430 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT4G00305 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT4G11370 RHA1A RING-H2 finger A1A 0.08 Archaeplastida
AT4G15975 No alias RING/U-box superfamily protein 0.06 Archaeplastida
AT4G17245 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT4G35480 RHA3B RING-H2 finger A3B 0.04 Archaeplastida
AT5G06490 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G27420 ATL31, CNI1 carbon/nitrogen insensitive 1 0.03 Archaeplastida
AT5G58580 ATL63, TL63 TOXICOS EN LEVADURA 63 0.03 Archaeplastida
AT5G66070 No alias RING/U-box superfamily protein 0.05 Archaeplastida
GSVIVT01000015001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
GSVIVT01000538001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
GSVIVT01009098001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01012020001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01015682001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01026703001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01027524001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01032684001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01037142001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01038717001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Gb_04301 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_04642 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_05004 No alias Probable E3 ubiquitin-protein ligase RHA1A... 0.02 Archaeplastida
Gb_05005 No alias E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis... 0.04 Archaeplastida
Gb_08038 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_14312 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_14775 No alias RING-H2 finger protein ATL78 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_14777 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_14788 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_15836 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Gb_28932 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_28973 No alias Probable E3 ubiquitin-protein ligase RHA1A... 0.02 Archaeplastida
Gb_28980 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_35043 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g11480.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os01g11520.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os01g53500.1 No alias RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g55110.1 No alias RING-H2-class E3 ligase 0.07 Archaeplastida
LOC_Os01g61470.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g15060.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g35329.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os02g35440.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os02g36300.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os02g36330.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g45390.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os02g45710.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g52210.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os03g22110.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os03g44636.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g57410.1 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os04g37740.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os04g49550.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
LOC_Os05g15170.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os06g09310.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os06g34560.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g34880.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os08g38460.1 No alias ubiquitin protein ligase (XERICO) 0.03 Archaeplastida
LOC_Os08g44950.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os09g30160.1 No alias ubiquitin protein ligase (XERICO) 0.03 Archaeplastida
LOC_Os10g39450.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os10g39770.1 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os10g39936.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os11g02424.1 No alias RING-H2 finger protein ATL74 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os11g39640.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os12g01750.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g02220.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g42530.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10106144g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_10427748g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10433358g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10436650g0010 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
MA_114175g0010 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
MA_12363g0010 No alias RING-H2-class E3 ligase 0.07 Archaeplastida
MA_152102g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_177169g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_2159g0010 No alias RING-H2 finger protein ATL78 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_25345g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_26001g0020 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_38494g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_391590g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_3929631g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_43543g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_465316g0010 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
MA_5319g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_569551g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_61738g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_6931619g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_71146g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_80729g0030 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_816764g0010 No alias NEP1-interacting protein-like 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_8609304g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_904294g0010 No alias RING-H2-class E3 ligase 0.07 Archaeplastida
MA_9143538g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g27170.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Mp3g00390.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Pp3c1_32230V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c1_9560V3.1 No alias TOXICOS EN LEVADURA 2 0.03 Archaeplastida
Pp3c23_1651V3.1 No alias RING/U-box superfamily protein 0.04 Archaeplastida
Smo96681 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Solyc01g066430.3.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc01g088440.2.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc01g109200.4.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc02g083400.3.1 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc03g114190.1.1 No alias RING-H2 finger protein ATL56 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc03g123680.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc04g007500.1.1 No alias RHA2 signal transducer of abscisic acid perception 0.03 Archaeplastida
Solyc05g008640.1.1 No alias RHA2 signal transducer of abscisic acid perception 0.03 Archaeplastida
Solyc06g053640.1.1 No alias RING-H2-class E3 ligase 0.08 Archaeplastida
Solyc06g150136.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc09g066300.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc09g075320.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc11g010330.3.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc11g066510.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc12g005020.2.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc12g055710.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e000398_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e002272_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e003126_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e003264_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e007103_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e007129_P001 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e007956_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e009017_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e009988_P001 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e010029_P001 No alias ubiquitin protein ligase (XERICO) 0.04 Archaeplastida
Zm00001e011306_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e013809_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e014709_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e014764_P001 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e015259_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e015470_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e015905_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e016474_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e017509_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e017960_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e018028_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e019779_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e022538_P002 No alias NEP1-interacting protein-like 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e022742_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e023238_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e023515_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e023585_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e023723_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e024702_P002 No alias NEP1-interacting protein-like 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e026193_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e031874_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e032186_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e034421_P001 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Zm00001e035560_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e039357_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e041409_P001 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004806 triglyceride lipase activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006897 endocytosis IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0098657 import into cell IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 68 113
No external refs found!