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  5. LOC_Os01g05744.1

LOC_Os01g05744.1


Description : 3-hydroxyacyl-CoA dehydratase (HCD)


Gene families : OG0003667 (Archaeplastida) Phylogenetic Tree(s): OG0003667_tree ,
OG_05_0003859 (LandPlants) Phylogenetic Tree(s): OG_05_0003859_tree ,
OG_06_0003683 (SeedPlants) Phylogenetic Tree(s): OG_06_0003683_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g05744.1
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
AT5G10480 PEP, PAS2 Protein-tyrosine phosphatase-like, PTPLA 0.03 Archaeplastida
MA_125121g0010 No alias Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... 0.04 Archaeplastida
MA_57869g0010 No alias Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... 0.04 Archaeplastida
Solyc04g014370.4.1 No alias 3-hydroxyacyl-CoA dehydratase (HCD) 0.06 Archaeplastida
Solyc11g010590.3.1 No alias Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... 0.04 Archaeplastida
Zm00001e025807_P001 No alias 3-hydroxyacyl-CoA dehydratase (HCD) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR007482 Tyr_Pase-like_PTPLA 59 220
No external refs found!