AMTR_s00001p00272280 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.512

Description : Vesicle trafficking.autophagosome formation.ATG1-13 autophagosome assembly control complex.ATG1 kinase component

Gene families : OG0001472 (Archaeplastida) Phylogenetic Tree(s): OG0001472_tree ,
OG_05_0001168 (LandPlants) Phylogenetic Tree(s): OG_05_0001168_tree ,
OG_06_0012757 (SeedPlants) Phylogenetic Tree(s): OG_06_0012757_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00001p00272280
Cluster	HCCA: Cluster_108

Target	Alias	Description	ECC score	Gene Family Method	Actions
GSVIVT01026573001	No alias	Vesicle trafficking.autophagosome formation.ATG1-13...	0.04	Archaeplastida
Pp3c19_5230V3.1	No alias	Protein kinase superfamily protein	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEP	Neighborhood
MF	GO:0003723	RNA binding	IEP	Neighborhood
MF	GO:0003993	acid phosphatase activity	IEP	Neighborhood
MF	GO:0004045	aminoacyl-tRNA hydrolase activity	IEP	Neighborhood
MF	GO:0004806	triglyceride lipase activity	IEP	Neighborhood
MF	GO:0004809	tRNA (guanine-N2-)-methyltransferase activity	IEP	Neighborhood
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005088	Ras guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005089	Rho guanyl-nucleotide exchange factor activity	IEP	Neighborhood
CC	GO:0005783	endoplasmic reticulum	IEP	Neighborhood
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Neighborhood
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	Neighborhood
BP	GO:0007154	cell communication	IEP	Neighborhood
BP	GO:0008033	tRNA processing	IEP	Neighborhood
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
MF	GO:0008170	N-methyltransferase activity	IEP	Neighborhood
MF	GO:0008173	RNA methyltransferase activity	IEP	Neighborhood
MF	GO:0008175	tRNA methyltransferase activity	IEP	Neighborhood
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	Neighborhood
BP	GO:0009116	nucleoside metabolic process	IEP	Neighborhood
BP	GO:0009119	ribonucleoside metabolic process	IEP	Neighborhood
BP	GO:0009186	deoxyribonucleoside diphosphate metabolic process	IEP	Neighborhood
BP	GO:0009451	RNA modification	IEP	Neighborhood
MF	GO:0009982	pseudouridine synthase activity	IEP	Neighborhood
BP	GO:0015969	guanosine tetraphosphate metabolic process	IEP	Neighborhood
MF	GO:0016298	lipase activity	IEP	Neighborhood
MF	GO:0016423	tRNA (guanine) methyltransferase activity	IEP	Neighborhood
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Neighborhood
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Neighborhood
MF	GO:0016791	phosphatase activity	IEP	Neighborhood
MF	GO:0016866	intramolecular transferase activity	IEP	Neighborhood
MF	GO:0017016	Ras GTPase binding	IEP	Neighborhood
MF	GO:0017048	Rho GTPase binding	IEP	Neighborhood
BP	GO:0019637	organophosphate metabolic process	IEP	Neighborhood
MF	GO:0019899	enzyme binding	IEP	Neighborhood
MF	GO:0031267	small GTPase binding	IEP	Neighborhood
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	Neighborhood
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	Neighborhood
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	Neighborhood
BP	GO:0034035	purine ribonucleoside bisphosphate metabolic process	IEP	Neighborhood
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Neighborhood
MF	GO:0035091	phosphatidylinositol binding	IEP	Neighborhood
BP	GO:0042278	purine nucleoside metabolic process	IEP	Neighborhood
BP	GO:0046128	purine ribonucleoside metabolic process	IEP	Neighborhood
BP	GO:0046483	heterocycle metabolic process	IEP	Neighborhood
MF	GO:0051020	GTPase binding	IEP	Neighborhood
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Neighborhood
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	Neighborhood
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Neighborhood
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Neighborhood
BP	GO:1901068	guanosine-containing compound metabolic process	IEP	Neighborhood
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Neighborhood
BP	GO:1901657	glycosyl compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000719	Prot_kinase_dom	1	183

External Links

No external refs found!

AMTR_s00001p00272280 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation