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  5. LOC_Os01g07170.1

LOC_Os01g07170.1


Description : Meiosis-specific protein PAIR2 OS=Oryza sativa subsp. japonica (sp|q76cy8|pair2_orysj : 90.5)


Gene families : OG0005089 (Archaeplastida) Phylogenetic Tree(s): OG0005089_tree ,
OG_05_0005136 (LandPlants) Phylogenetic Tree(s): OG_05_0005136_tree ,
OG_06_0004112 (SeedPlants) Phylogenetic Tree(s): OG_06_0004112_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g07170.1
Cluster HCCA: Cluster_348

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00186300 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.meiotic... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003511 HORMA_dom 84 147
No external refs found!