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  5. LOC_Os01g31680.1

LOC_Os01g31680.1


Description : component cpTatC of thylakoid membrane Tat translocation system


Gene families : OG0005496 (Archaeplastida) Phylogenetic Tree(s): OG0005496_tree ,
OG_05_0006244 (LandPlants) Phylogenetic Tree(s): OG_05_0006244_tree ,
OG_06_0007365 (SeedPlants) Phylogenetic Tree(s): OG_06_0007365_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g31680.1
Cluster HCCA: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
AT2G01110 PGA2, APG2, TATC, UNE3 Sec-independent periplasmic protein translocase 0.07 Archaeplastida
Cpa|evm.model.tig00020830.32 No alias Protein translocation.chloroplast.thylakoid membrane Tat... 0.01 Archaeplastida
Cre03.g145887 No alias Protein translocation.chloroplast.thylakoid membrane Tat... 0.03 Archaeplastida
GSVIVT01011805001 No alias Protein translocation.chloroplast.thylakoid membrane Tat... 0.07 Archaeplastida
Gb_02135 No alias component cpTatC of thylakoid membrane Tat translocation system 0.09 Archaeplastida
MA_10436783g0020 No alias component cpTatC of thylakoid membrane Tat translocation system 0.07 Archaeplastida
Mp5g23950.1 No alias component cpTatC of thylakoid membrane Tat translocation system 0.02 Archaeplastida
Pp3c3_36440V3.1 No alias Sec-independent periplasmic protein translocase 0.03 Archaeplastida
Pp3c8_3800V3.1 No alias Sec-independent periplasmic protein translocase 0.06 Archaeplastida
Smo89134 No alias Protein translocation.chloroplast.thylakoid membrane Tat... 0.04 Archaeplastida
Solyc05g008530.3.1 No alias component cpTatC of thylakoid membrane Tat translocation system 0.07 Archaeplastida
Zm00001e000897_P002 No alias component cpTatC of thylakoid membrane Tat translocation system 0.08 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004325 ferrochelatase activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0006783 heme biosynthetic process IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0042168 heme metabolic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0043647 inositol phosphate metabolic process IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
BP GO:0046434 organophosphate catabolic process IEP Neighborhood
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Neighborhood
BP GO:0046855 inositol phosphate dephosphorylation IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071545 inositol phosphate catabolic process IEP Neighborhood
BP GO:0071586 CAAX-box protein processing IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002033 TatC 134 342
No external refs found!