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  5. LOC_Os01g33300.1

LOC_Os01g33300.1


Description : Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize : 459.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 259.1)


Gene families : OG0000535 (Archaeplastida) Phylogenetic Tree(s): OG0000535_tree ,
OG_05_0000281 (LandPlants) Phylogenetic Tree(s): OG_05_0000281_tree ,
OG_06_0000124 (SeedPlants) Phylogenetic Tree(s): OG_06_0000124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g33300.1
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00270640 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.17 Archaeplastida
AMTR_s00019p00055210 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectin lyase 0.03 Archaeplastida
AMTR_s00019p00057300 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 Archaeplastida
AMTR_s00019p00130680 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectin lyase 0.03 Archaeplastida
AMTR_s00051p00052460 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 Archaeplastida
AMTR_s00059p00207710 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 Archaeplastida
AT1G02790 PGA4 polygalacturonase 4 0.07 Archaeplastida
AT3G07820 No alias Pectin lyase-like superfamily protein 0.14 Archaeplastida
AT3G07830 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
AT3G07850 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
AT3G14040 No alias Pectin lyase-like superfamily protein 0.07 Archaeplastida
AT5G48140 No alias Pectin lyase-like superfamily protein 0.1 Archaeplastida
GSVIVT01020794001 No alias Polygalacturonase OS=Nicotiana tabacum 0.02 Archaeplastida
GSVIVT01028044001 No alias Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana 0.1 Archaeplastida
GSVIVT01030017001 No alias Polygalacturonase OS=Gossypium hirsutum 0.07 Archaeplastida
GSVIVT01030023001 No alias Polygalacturonase OS=Gossypium hirsutum 0.08 Archaeplastida
GSVIVT01030030001 No alias Polygalacturonase OS=Gossypium hirsutum 0.05 Archaeplastida
GSVIVT01035103001 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia 0.1 Archaeplastida
LOC_Os06g35320.1 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.1 Archaeplastida
LOC_Os08g23790.1 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.04 Archaeplastida
Solyc01g066070.3.1 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.11 Archaeplastida
Solyc06g009200.3.1 No alias Polygalacturonase OS=Nicotiana tabacum... 0.1 Archaeplastida
Solyc07g044870.4.1 No alias Polygalacturonase OS=Nicotiana tabacum... 0.06 Archaeplastida
Solyc12g006293.1.1 No alias Polygalacturonase OS=Nicotiana tabacum... 0.04 Archaeplastida
Solyc12g006313.1.1 No alias Polygalacturonase OS=Nicotiana tabacum... 0.04 Archaeplastida
Zm00001e002846_P002 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.05 Archaeplastida
Zm00001e014066_P002 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.03 Archaeplastida
Zm00001e014069_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.02 Archaeplastida
Zm00001e014072_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.02 Archaeplastida
Zm00001e017747_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.11 Archaeplastida
Zm00001e022246_P002 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.05 Archaeplastida
Zm00001e025021_P003 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.16 Archaeplastida
Zm00001e026354_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.1 Archaeplastida
Zm00001e030524_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.08 Archaeplastida
Zm00001e030525_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.07 Archaeplastida
Zm00001e030528_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35338|pglr2_maize... 0.1 Archaeplastida
Zm00001e030529_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35338|pglr2_maize... 0.09 Archaeplastida
Zm00001e030530_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize... 0.13 Archaeplastida
Zm00001e030532_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35338|pglr2_maize : 345.0) 0.06 Archaeplastida
Zm00001e030533_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize... 0.09 Archaeplastida
Zm00001e030534_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize... 0.08 Archaeplastida
Zm00001e030535_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize... 0.08 Archaeplastida
Zm00001e030537_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize... 0.08 Archaeplastida
Zm00001e030541_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize... 0.02 Archaeplastida
Zm00001e030542_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35338|pglr2_maize... 0.04 Archaeplastida
Zm00001e042494_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize... 0.09 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006099 tricarboxylic acid cycle IEP Neighborhood
BP GO:0006101 citrate metabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007264 small GTPase mediated signal transduction IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015977 carbon fixation IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016832 aldehyde-lyase activity IEP Neighborhood
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
BP GO:0016999 antibiotic metabolic process IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
MF GO:0030570 pectate lyase activity IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0070569 uridylyltransferase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0072350 tricarboxylic acid metabolic process IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 72 394
No external refs found!