1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00002p00174180

AMTR_s00002p00174180 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.146

Description : Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen lyase


Gene families : OG0000037 (Archaeplastida) Phylogenetic Tree(s): OG0000037_tree ,
OG_05_0000011 (LandPlants) Phylogenetic Tree(s): OG_05_0000011_tree ,
OG_06_0000002 (SeedPlants) Phylogenetic Tree(s): OG_06_0000002_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00174180
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00255250 evm_27.TU.AmTr_v1... Secondary metabolism.terpenoids.terpenoid... 0.03 Archaeplastida
AT3G14520 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.02 Archaeplastida
GSVIVT01036312001 No alias Secondary metabolism.terpenoids.terpenoid... 0.03 Archaeplastida
GSVIVT01036317001 No alias Secondary metabolism.terpenoids.terpenoid... 0.03 Archaeplastida
GSVIVT01036338001 No alias Sesquiterpene synthase OS=Santalum austrocaledonicum 0.02 Archaeplastida
GSVIVT01036345001 No alias Secondary metabolism.terpenoids.terpenoid... 0.02 Archaeplastida
GSVIVT01036346001 No alias Valencene synthase OS=Vitis vinifera 0.02 Archaeplastida
GSVIVT01036366001 No alias Secondary metabolism.terpenoids.terpenoid... 0.03 Archaeplastida
GSVIVT01036371001 No alias Valencene synthase OS=Vitis vinifera 0.04 Archaeplastida
Gb_00720 No alias mono-/sesquiterpene-/diterpene synthase. ent-copalyl... 0.03 Archaeplastida
Gb_11598 No alias mono-/sesquiterpene-/diterpene synthase 0.03 Archaeplastida
MA_10429330g0010 No alias Pinene synthase, chloroplastic OS=Picea sitchensis... 0.01 Archaeplastida
MA_10434542g0010 No alias mono-/sesquiterpene-/diterpene synthase 0.02 Archaeplastida
MA_10435706g0010 No alias mono-/sesquiterpene-/diterpene synthase 0.02 Archaeplastida
MA_136166g0010 No alias mono-/sesquiterpene-/diterpene synthase 0.01 Archaeplastida
MA_25537g0010 No alias mono-/sesquiterpene-/diterpene synthase 0.03 Archaeplastida
Solyc01g105890.3.1 No alias mono-/sesquiterpene-/diterpene synthase 0.02 Archaeplastida
Solyc04g054380.1.1 No alias mono-/sesquiterpene-/diterpene synthase 0.03 Archaeplastida
Solyc06g059930.4.1 No alias mono-/sesquiterpene-/diterpene synthase 0.03 Archaeplastida
Solyc07g008690.3.1 No alias mono-/sesquiterpene-/diterpene synthase 0.03 Archaeplastida
Solyc07g052120.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e029665_P001 No alias mono-/sesquiterpene-/diterpene synthase 0.03 Archaeplastida
Zm00001e039932_P001 No alias mono-/sesquiterpene-/diterpene synthase 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0008152 metabolic process IEA Interproscan
MF GO:0010333 terpene synthase activity IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0019205 nucleobase-containing compound kinase activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 5 71
No external refs found!