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  5. LOC_Os01g56100.1

LOC_Os01g56100.1


Description : transcription factor (BSD)


Gene families : OG0002495 (Archaeplastida) Phylogenetic Tree(s): OG0002495_tree ,
OG_05_0001801 (LandPlants) Phylogenetic Tree(s): OG_05_0001801_tree ,
OG_06_0001671 (SeedPlants) Phylogenetic Tree(s): OG_06_0001671_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g56100.1
Cluster HCCA: Cluster_293

Target Alias Description ECC score Gene Family Method Actions
AT5G65910 No alias BSD domain-containing protein 0.03 Archaeplastida
GSVIVT01004312001 No alias RNA biosynthesis.transcriptional activation.BSD... 0.04 Archaeplastida
Pp3c7_13740V3.1 No alias BSD domain-containing protein 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR005607 BSD_dom 187 242
No external refs found!