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  5. LOC_Os01g61990.2

LOC_Os01g61990.2


Description : Ankyrin repeat-containing protein NPR4 OS=Oryza sativa subsp. japonica (sp|a2cir5|npr4_orysj : 848.0)


Gene families : OG0000647 (Archaeplastida) Phylogenetic Tree(s): OG0000647_tree ,
OG_05_0000409 (LandPlants) Phylogenetic Tree(s): OG_05_0000409_tree ,
OG_06_0003161 (SeedPlants) Phylogenetic Tree(s): OG_06_0003161_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g61990.2
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00034p00179220 evm_27.TU.AmTr_v1... Ankyrin repeat-containing protein At5g02620... 0.03 Archaeplastida
AMTR_s00088p00076560 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00109p00146120 evm_27.TU.AmTr_v1... Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT1G10340 No alias Ankyrin repeat family protein 0.04 Archaeplastida
AT1G34050 No alias Ankyrin repeat family protein 0.05 Archaeplastida
AT2G24600 No alias Ankyrin repeat family protein 0.04 Archaeplastida
AT3G12360 ITN1 Ankyrin repeat family protein 0.04 Archaeplastida
AT5G02620 ATANK1, ANK1 ankyrin-like1 0.02 Archaeplastida
AT5G54710 No alias Ankyrin repeat family protein 0.03 Archaeplastida
AT5G54720 No alias Ankyrin repeat family protein 0.04 Archaeplastida
GSVIVT01025591001 No alias Ankyrin repeat-containing protein At5g02620... 0.04 Archaeplastida
GSVIVT01025592001 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01032614001 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01035638001 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_06243 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.02 Archaeplastida
Gb_13078 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os03g17250.1 No alias Ankyrin repeat-containing protein At5g02620... 0.01 Archaeplastida
MA_10427678g0010 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.03 Archaeplastida
Solyc01g005340.3.1 No alias Ankyrin repeat-containing protein At2g01680... 0.02 Archaeplastida
Solyc05g054830.3.1 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.04 Archaeplastida
Solyc06g075600.3.1 No alias Ankyrin repeat-containing protein At5g02620... 0.03 Archaeplastida
Solyc08g014570.3.1 No alias Ankyrin repeat-containing protein At5g02620... 0.03 Archaeplastida
Solyc08g066770.3.1 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.07 Archaeplastida
Solyc09g005860.3.1 No alias Ankyrin repeat-containing protein At5g02620... 0.02 Archaeplastida
Zm00001e001261_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e010178_P002 No alias Ankyrin repeat-containing protein At5g02620... 0.04 Archaeplastida
Zm00001e019361_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e038455_P002 No alias no hits & (original description: none) 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006771 riboflavin metabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009231 riboflavin biosynthetic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
MF GO:0009916 alternative oxidase activity IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042726 flavin-containing compound metabolic process IEP Neighborhood
BP GO:0042727 flavin-containing compound biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR026961 PGG_dom 405 511
IPR020683 Ankyrin_rpt-contain_dom 256 319
IPR020683 Ankyrin_rpt-contain_dom 189 250
IPR020683 Ankyrin_rpt-contain_dom 99 175
No external refs found!