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  5. LOC_Os01g63240.1

LOC_Os01g63240.1


Description : ER-associated protein (Reticulon)


Gene families : OG0000225 (Archaeplastida) Phylogenetic Tree(s): OG0000225_tree ,
OG_05_0000137 (LandPlants) Phylogenetic Tree(s): OG_05_0000137_tree ,
OG_06_0001141 (SeedPlants) Phylogenetic Tree(s): OG_06_0001141_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g63240.1
Cluster HCCA: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
AT4G01230 No alias Reticulon family protein 0.02 Archaeplastida
GSVIVT01005053001 No alias Reticulon-like protein B13 OS=Arabidopsis thaliana 0.03 Archaeplastida
Pp3c3_26340V3.1 No alias Reticulon family protein 0.02 Archaeplastida
Pp3c3_26400V3.1 No alias Reticulon family protein 0.02 Archaeplastida
Smo86151 No alias Reticulon-like protein B2 OS=Arabidopsis thaliana 0.05 Archaeplastida
Solyc03g119190.3.1 No alias ER-associated protein (Reticulon) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003388 Reticulon 27 183
No external refs found!