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  5. LOC_Os02g27300.1

LOC_Os02g27300.1


Description : Pathogenesis-related protein PRMS OS=Zea mays (sp|q00008|prms_maize : 156.0)


Gene families : OG0000081 (Archaeplastida) Phylogenetic Tree(s): OG0000081_tree ,
OG_05_0000056 (LandPlants) Phylogenetic Tree(s): OG_05_0000056_tree ,
OG_06_0069258 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g27300.1
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00263870 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.03 Archaeplastida
AMTR_s00019p00199580 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.03 Archaeplastida
AMTR_s00019p00200490 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.02 Archaeplastida
AMTR_s00029p00197310 evm_27.TU.AmTr_v1... Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.02 Archaeplastida
AT1G50050 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Archaeplastida
AT4G07820 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.02 Archaeplastida
AT4G33710 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.02 Archaeplastida
AT4G33720 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.02 Archaeplastida
AT5G26130 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Archaeplastida
AT5G66590 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.02 Archaeplastida
GSVIVT01038540001 No alias Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.02 Archaeplastida
Gb_13683 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 Archaeplastida
LOC_Os01g28450.1 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.03 Archaeplastida
LOC_Os01g28500.1 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.05 Archaeplastida
LOC_Os07g03319.1 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.04 Archaeplastida
LOC_Os07g03409.1 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.04 Archaeplastida
LOC_Os07g03467.1 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.04 Archaeplastida
LOC_Os07g03499.1 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.04 Archaeplastida
LOC_Os07g03590.1 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.04 Archaeplastida
LOC_Os07g03600.1 No alias Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare... 0.05 Archaeplastida
LOC_Os07g03620.1 No alias Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare... 0.04 Archaeplastida
LOC_Os07g03710.1 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.04 Archaeplastida
LOC_Os07g03730.1 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.03 Archaeplastida
LOC_Os07g03750.1 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum... 0.04 Archaeplastida
LOC_Os10g11500.1 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.05 Archaeplastida
MA_171461g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_53673g0010 No alias Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.02 Archaeplastida
Mp5g16820.1 No alias Basic form of pathogenesis-related protein 1... 0.02 Archaeplastida
Mp6g06400.1 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.01 Archaeplastida
Mp7g00440.1 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.01 Archaeplastida
Mp7g13960.1 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.02 Archaeplastida
Smo230161 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum 0.02 Archaeplastida
Solyc02g065470.1.1 No alias STS14 protein OS=Solanum tuberosum (sp|q41495|st14_soltu : 284.0) 0.03 Archaeplastida
Zm00001e002028_P001 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.02 Archaeplastida
Zm00001e023732_P001 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
BP GO:0015693 magnesium ion transport IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0045017 glycerolipid biosynthetic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR014044 CAP_domain 46 168
No external refs found!