1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os02g28980.1

LOC_Os02g28980.1


Description : protein folding catalyst (FKBP)


Gene families : OG0001190 (Archaeplastida) Phylogenetic Tree(s): OG0001190_tree ,
OG_05_0002466 (LandPlants) Phylogenetic Tree(s): OG_05_0002466_tree ,
OG_06_0002217 (SeedPlants) Phylogenetic Tree(s): OG_06_0002217_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g28980.1
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
AT3G25230 FKBP62, ROF1, ATFKBP62 rotamase FKBP 1 0.08 Archaeplastida
AT5G48570 ROF2, FKBP65, ATFKBP65 FKBP-type peptidyl-prolyl cis-trans isomerase family protein 0.04 Archaeplastida
Cre09.g398067 No alias Protein modification.protein folding and quality... 0.09 Archaeplastida
GSVIVT01002527001 No alias Protein modification.protein folding and quality... 0.14 Archaeplastida
Gb_32210 No alias protein folding catalyst (FKBP) 0.08 Archaeplastida
Gb_32981 No alias protein folding catalyst (FKBP) 0.1 Archaeplastida
Pp3c19_2600V3.1 No alias rotamase FKBP 1 0.07 Archaeplastida
Smo443450 No alias Protein modification.protein folding and quality... 0.12 Archaeplastida
Solyc06g083190.4.1 No alias protein folding catalyst (FKBP) 0.13 Archaeplastida
Solyc09g092690.3.1 No alias protein folding catalyst (FKBP) 0.05 Archaeplastida
Zm00001e003628_P002 No alias protein folding catalyst (FKBP) 0.12 Archaeplastida
Zm00001e008589_P001 No alias protein folding catalyst (FKBP) 0.14 Archaeplastida
Zm00001e010597_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e014574_P002 No alias protein folding catalyst (FKBP) 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001671 ATPase activator activity IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001440 TPR_1 539 572
IPR001179 PPIase_FKBP_dom 225 315
IPR001179 PPIase_FKBP_dom 109 198
IPR001179 PPIase_FKBP_dom 341 435
No external refs found!