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  5. LOC_Os02g40900.1

LOC_Os02g40900.1


Description : no hits & (original description: none)


Gene families : OG0004452 (Archaeplastida) Phylogenetic Tree(s): OG0004452_tree ,
OG_05_0004636 (LandPlants) Phylogenetic Tree(s): OG_05_0004636_tree ,
OG_06_0004124 (SeedPlants) Phylogenetic Tree(s): OG_06_0004124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g40900.1
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00070310 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
GSVIVT01023509001 No alias No description available 0.11 Archaeplastida
Pp3c23_14650V3.1 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Archaeplastida
Solyc05g055010.4.1 No alias no hits & (original description: none) 0.14 Archaeplastida
Zm00001e023018_P002 No alias no hits & (original description: none) 0.25 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001671 ATPase activator activity IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 128 198
No external refs found!