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  5. LOC_Os02g47744.1

LOC_Os02g47744.1


Description : transcription factor (MYB-related)


Gene families : OG0000067 (Archaeplastida) Phylogenetic Tree(s): OG0000067_tree ,
OG_05_0000767 (LandPlants) Phylogenetic Tree(s): OG_05_0000767_tree ,
OG_06_0000381 (SeedPlants) Phylogenetic Tree(s): OG_06_0000381_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g47744.1
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
AT1G70000 No alias myb-like transcription factor family protein 0.03 Archaeplastida
AT3G10590 No alias Duplicated homeodomain-like superfamily protein 0.02 Archaeplastida
AT3G11280 No alias Duplicated homeodomain-like superfamily protein 0.02 Archaeplastida
AT5G56840 No alias myb-like transcription factor family protein 0.02 Archaeplastida
Cre10.g430750 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01013684001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01013871001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01016370001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
LOC_Os01g09280.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
LOC_Os05g50350.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_16729g0010 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_254136g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_488767g0010 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Solyc03g096350.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc05g013430.1.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Solyc08g065380.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc12g008800.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e002313_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e020633_P001 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Zm00001e027835_P005 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e032519_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!