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  5. LOC_Os02g54160.2

LOC_Os02g54160.2


Description : transcription factor (ERF)


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000007 (SeedPlants) Phylogenetic Tree(s): OG_06_0000007_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g54160.2
Cluster HCCA: Cluster_315

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00133970 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00099p00122430 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00111p00113030 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
AMTR_s00148p00084540 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00150p00091360 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AT1G22190 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G28370 ATERF11, ERF11 ERF domain protein 11 0.05 Archaeplastida
AT1G53910 RAP2.12 related to AP2 12 0.03 Archaeplastida
AT1G64380 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G78080 RAP2.4 related to AP2 4 0.03 Archaeplastida
AT2G44840 ATERF13, ERF13, EREBP ethylene-responsive element binding factor 13 0.02 Archaeplastida
AT3G20310 ERF7, ATERF7, ATERF-7 ethylene response factor 7 0.03 Archaeplastida
AT4G34410 RRTF1 redox responsive transcription factor 1 0.03 Archaeplastida
AT5G47230 ERF5, ATERF-5, ATERF5 ethylene responsive element binding factor 5 0.03 Archaeplastida
GSVIVT01010629001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.07 Archaeplastida
GSVIVT01016684001 No alias Ethylene-responsive transcription factor RAP2-12... 0.04 Archaeplastida
GSVIVT01021146001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01032961001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01037712001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
Gb_12588 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_26667 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_29263 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os02g45450.1 No alias Dehydration-responsive element-binding protein 1G... 0.04 Archaeplastida
LOC_Os02g54050.1 No alias Ethylene-responsive transcription factor ERF018... 0.04 Archaeplastida
LOC_Os09g26420.5 No alias transcription factor (ERF) 0.02 Archaeplastida
Mp4g00380.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c22_1800V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c4_2660V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c4_2680V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c9_2020V3.1 No alias erf domain protein 9 0.02 Archaeplastida
Smo409196 No alias External stimuli response.biotic... 0.02 Archaeplastida
Smo69413 No alias Ethylene-responsive transcription factor ERF037... 0.02 Archaeplastida
Solyc01g057080.1.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc01g091760.3.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.03 Archaeplastida
Solyc01g108240.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc02g090770.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc02g090800.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc02g093130.3.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc03g093550.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc03g093610.1.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc03g116610.3.1 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 Archaeplastida
Solyc03g124110.2.1 No alias transcription factor (DREB). transcription factor (CBF/DREB1) 0.04 Archaeplastida
Solyc06g035700.1.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc06g054630.3.1 No alias transcription factor (DREB) 0.02 Archaeplastida
Solyc06g082590.1.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc07g053740.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc08g007820.1.1 No alias transcription factor (DREB) 0.04 Archaeplastida
Solyc08g007830.1.1 No alias Dehydration-responsive element-binding protein 1F... 0.04 Archaeplastida
Solyc08g078190.2.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc10g006130.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc10g009110.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc10g050960.3.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc10g050970.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e013096_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e014008_P002 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.02 Archaeplastida
Zm00001e026989_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e034661_P001 No alias Ethylene-responsive transcription factor ERF115... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
BP GO:0052646 alditol phosphate metabolic process IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0061608 nuclear import signal receptor activity IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
MF GO:0140142 nucleocytoplasmic carrier activity IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 120 168
No external refs found!