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  5. LOC_Os03g03600.1

LOC_Os03g03600.1


Description : fasciclin-type arabinogalactan protein


Gene families : OG0000381 (Archaeplastida) Phylogenetic Tree(s): OG0000381_tree ,
OG_05_0000190 (LandPlants) Phylogenetic Tree(s): OG_05_0000190_tree ,
OG_06_0000684 (SeedPlants) Phylogenetic Tree(s): OG_06_0000684_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g03600.1
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00195530 evm_27.TU.AmTr_v1... External stimuli response.salinity.SOS (Salt Overly... 0.03 Archaeplastida
AMTR_s00019p00223190 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
AMTR_s00069p00195790 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 Archaeplastida
AT2G45470 AGP8, FLA8 FASCICLIN-like arabinogalactan protein 8 0.04 Archaeplastida
AT3G60900 FLA10 FASCICLIN-like arabinogalactan-protein 10 0.03 Archaeplastida
AT4G12730 FLA2 FASCICLIN-like arabinogalactan 2 0.11 Archaeplastida
AT4G31370 FLA5 FASCICLIN-like arabinogalactan protein 5 precursor 0.03 Archaeplastida
GSVIVT01014684001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
GSVIVT01030085001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.08 Archaeplastida
Gb_05461 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
Gb_12627 No alias fasciclin-type arabinogalactan protein 0.05 Archaeplastida
Gb_27317 No alias fasciclin-type arabinogalactan protein. regulatory... 0.03 Archaeplastida
Gb_40985 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida
LOC_Os06g44660.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
MA_10433947g0010 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida
MA_10433947g0020 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida
MA_137299g0010 No alias fasciclin-type arabinogalactan protein. regulatory... 0.05 Archaeplastida
MA_16264g0020 No alias fasciclin-type arabinogalactan protein. regulatory... 0.05 Archaeplastida
MA_177793g0010 No alias Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis... 0.02 Archaeplastida
MA_4138042g0010 No alias No annotation 0.01 Archaeplastida
MA_5116514g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp4g14280.1 No alias fasciclin-type arabinogalactan protein 0.05 Archaeplastida
Mp5g05390.1 No alias fasciclin-type arabinogalactan protein 0.05 Archaeplastida
Mp5g05430.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Mp5g05440.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Mp5g05450.1 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida
Mp5g05460.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Mp5g10880.1 No alias fasciclin-type arabinogalactan protein 0.06 Archaeplastida
Mp8g03130.1 No alias fasciclin-type arabinogalactan protein. regulatory... 0.02 Archaeplastida
Pp3c26_5590V3.1 No alias Fasciclin-like arabinogalactan family protein 0.06 Archaeplastida
Pp3c4_16840V3.1 No alias FASCICLIN-like arabinogalactan protein 8 0.04 Archaeplastida
Smo441324 No alias Fasciclin-like arabinogalactan protein 8 OS=Arabidopsis thaliana 0.07 Archaeplastida
Solyc01g091530.4.1 No alias classical arabinogalactan protein. fasciclin-type... 0.03 Archaeplastida
Solyc06g076120.2.1 No alias Fasciclin-like arabinogalactan protein 4 OS=Arabidopsis... 0.02 Archaeplastida
Solyc07g045440.1.1 No alias fasciclin-type arabinogalactan protein 0.1 Archaeplastida
Solyc07g065540.1.1 No alias fasciclin-type arabinogalactan protein 0.06 Archaeplastida
Solyc08g006295.1.1 No alias fasciclin-type arabinogalactan protein 0.06 Archaeplastida
Solyc10g005960.1.1 No alias fasciclin-type arabinogalactan protein 0.05 Archaeplastida
Solyc12g006110.3.1 No alias fasciclin-type arabinogalactan protein 0.07 Archaeplastida
Solyc12g015690.3.1 No alias fasciclin-type arabinogalactan protein 0.05 Archaeplastida
Zm00001e019325_P001 No alias fasciclin-type arabinogalactan protein. regulatory... 0.01 Archaeplastida
Zm00001e023434_P001 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida
Zm00001e024334_P001 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Zm00001e030421_P001 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
Zm00001e031109_P001 No alias fasciclin-type arabinogalactan protein 0.1 Archaeplastida
Zm00001e031831_P001 No alias fasciclin-type arabinogalactan protein. regulatory... 0.04 Archaeplastida
Zm00001e033729_P002 No alias fasciclin-type arabinogalactan protein 0.09 Archaeplastida
Zm00001e036843_P001 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Zm00001e037697_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005484 SNAP receptor activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0046658 anchored component of plasma membrane IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000782 FAS1_domain 198 327
No external refs found!