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  5. LOC_Os03g05830.1

LOC_Os03g05830.1


Description : no hits & (original description: none)


Gene families : OG0003285 (Archaeplastida) Phylogenetic Tree(s): OG0003285_tree ,
OG_05_0003755 (LandPlants) Phylogenetic Tree(s): OG_05_0003755_tree ,
OG_06_0004534 (SeedPlants) Phylogenetic Tree(s): OG_06_0004534_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g05830.1
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00234440 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
Cpa|evm.model.tig00001302.16 No alias No description available 0.01 Archaeplastida
GSVIVT01023998001 No alias No description available 0.03 Archaeplastida
Gb_11513 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_39308 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10430689g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g005170.2.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e004710_P005 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e012773_P005 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e038994_P002 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0004000 adenosine deaminase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004649 poly(ADP-ribose) glycohydrolase activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006497 protein lipidation IEP Neighborhood
BP GO:0006505 GPI anchor metabolic process IEP Neighborhood
BP GO:0006506 GPI anchor biosynthetic process IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Neighborhood
BP GO:0006664 glycolipid metabolic process IEP Neighborhood
BP GO:0007030 Golgi organization IEP Neighborhood
BP GO:0007155 cell adhesion IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
BP GO:0009247 glycolipid biosynthetic process IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
BP GO:0015693 magnesium ion transport IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Neighborhood
MF GO:0019239 deaminase activity IEP Neighborhood
BP GO:0022610 biological adhesion IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0045017 glycerolipid biosynthetic process IEP Neighborhood
BP GO:0046467 membrane lipid biosynthetic process IEP Neighborhood
BP GO:0046474 glycerophospholipid biosynthetic process IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
BP GO:1903509 liposaccharide metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 289 359
IPR000504 RRM_dom 527 579
IPR000504 RRM_dom 196 259
IPR029123 RBM39_linker 413 520
No external refs found!