LOC_Os03g07290.1

Description : no hits & (original description: none)

Gene families : OG0006004 (Archaeplastida) Phylogenetic Tree(s): OG0006004_tree ,
OG_05_0007155 (LandPlants) Phylogenetic Tree(s): OG_05_0007155_tree ,
OG_06_0006786 (SeedPlants) Phylogenetic Tree(s): OG_06_0006786_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g07290.1
Cluster	HCCA: Cluster_175

Target	Alias	Description	ECC score	Gene Family Method
AT1G26740	No alias	Ribosomal L32p protein family	0.04	Archaeplastida
Cpa\|evm.model.tig00000319.29	No alias	No description available	0.02	Archaeplastida
Pp3c1_32410V3.1	No alias	Ribosomal L32p protein family	0.02	Archaeplastida
Zm00001e000520_P001	No alias	no hits & (original description: none)	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0015934	large ribosomal subunit	IEA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044391	ribosomal subunit	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000275	mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)	IEP	Neighborhood
MF	GO:0003712	transcription coregulator activity	IEP	Neighborhood
MF	GO:0003954	NADH dehydrogenase activity	IEP	Neighborhood
CC	GO:0005739	mitochondrion	IEP	Neighborhood
CC	GO:0005759	mitochondrial matrix	IEP	Neighborhood
CC	GO:0005840	ribosome	IEP	Neighborhood
BP	GO:0006352	DNA-templated transcription, initiation	IEP	Neighborhood
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Neighborhood
BP	GO:0006754	ATP biosynthetic process	IEP	Neighborhood
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IEP	Neighborhood
BP	GO:0009124	nucleoside monophosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009127	purine nucleoside monophosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009156	ribonucleoside monophosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009168	purine ribonucleoside monophosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	Neighborhood
MF	GO:0015078	proton transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015985	energy coupled proton transport, down electrochemical gradient	IEP	Neighborhood
BP	GO:0015986	ATP synthesis coupled proton transport	IEP	Neighborhood
CC	GO:0016592	mediator complex	IEP	Neighborhood
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	Neighborhood
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	Neighborhood
BP	GO:0018130	heterocycle biosynthetic process	IEP	Neighborhood
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Neighborhood
MF	GO:0019829	cation-transporting ATPase activity	IEP	Neighborhood
CC	GO:0019867	outer membrane	IEP	Neighborhood
MF	GO:0022853	active ion transmembrane transporter activity	IEP	Neighborhood
CC	GO:0031974	membrane-enclosed lumen	IEP	Neighborhood
CC	GO:0033178	proton-transporting two-sector ATPase complex, catalytic domain	IEP	Neighborhood
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Neighborhood
MF	GO:0042623	ATPase activity, coupled	IEP	Neighborhood
MF	GO:0042625	ATPase coupled ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEP	Neighborhood
CC	GO:0043226	organelle	IEP	Neighborhood
CC	GO:0043228	non-membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043229	intracellular organelle	IEP	Neighborhood
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043233	organelle lumen	IEP	Neighborhood
MF	GO:0043492	ATPase activity, coupled to movement of substances	IEP	Neighborhood
CC	GO:0044429	mitochondrial part	IEP	Neighborhood
CC	GO:0044451	nucleoplasm part	IEP	Neighborhood
CC	GO:0044455	mitochondrial membrane part	IEP	Neighborhood
MF	GO:0044769	ATPase activity, coupled to transmembrane movement of ions, rotational mechanism	IEP	Neighborhood
CC	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)	IEP	Neighborhood
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IEP	Neighborhood
MF	GO:0050136	NADH dehydrogenase (quinone) activity	IEP	Neighborhood
CC	GO:0070013	intracellular organelle lumen	IEP	Neighborhood
CC	GO:0098798	mitochondrial protein complex	IEP	Neighborhood
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	Neighborhood
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Neighborhood
BP	GO:1902600	proton transmembrane transport	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002677	Ribosomal_L32p	58	102

External Links

No external refs found!

LOC_Os03g07290.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation