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  5. LOC_Os03g07890.1

LOC_Os03g07890.1


Description : solute transporter (MTCC)


Gene families : OG0000877 (Archaeplastida) Phylogenetic Tree(s): OG0000877_tree ,
OG_05_0003139 (LandPlants) Phylogenetic Tree(s): OG_05_0003139_tree ,
OG_06_0003454 (SeedPlants) Phylogenetic Tree(s): OG_06_0003454_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g07890.1
Cluster HCCA: Cluster_355

Target Alias Description ECC score Gene Family Method Actions
AT5G26200 No alias Mitochondrial substrate carrier family protein 0.03 Archaeplastida
GSVIVT01035441001 No alias Solute transport.carrier-mediated transport.MC-type... 0.04 Archaeplastida
Gb_28306 No alias solute transporter (MTCC) 0.04 Archaeplastida
Smo413389 No alias Solute transport.carrier-mediated transport.MC-type... 0.02 Archaeplastida
Solyc12g096030.1.1 No alias solute transporter (MTCC) 0.05 Archaeplastida
Zm00001e012840_P001 No alias solute transporter (MTCC) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR018108 Mitochondrial_sb/sol_carrier 238 325
IPR018108 Mitochondrial_sb/sol_carrier 46 116
IPR018108 Mitochondrial_sb/sol_carrier 133 219
No external refs found!