LOC_Os03g09230.1


Description : xylogen-type arabinogalactan protein


Gene families : OG0000162 (Archaeplastida) Phylogenetic Tree(s): OG0000162_tree ,
OG_05_0000065 (LandPlants) Phylogenetic Tree(s): OG_05_0000065_tree ,
OG_06_0000223 (SeedPlants) Phylogenetic Tree(s): OG_06_0000223_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g09230.1
Cluster HCCA: Cluster_291

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00240480 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
AMTR_s00119p00120480 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.06 Archaeplastida
AT1G55260 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Archaeplastida
AT2G13820 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT2G44290 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Archaeplastida
AT2G48130 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT2G48140 EDA4 Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT3G22620 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.06 Archaeplastida
AT3G58550 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT4G14815 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Archaeplastida
GSVIVT01025413001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 Archaeplastida
Gb_02441 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Gb_02455 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Gb_11754 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
MA_71069g0010 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Pp3c1_31020V3.1 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
Pp3c2_6280V3.1 No alias glycosylphosphatidylinositol-anchored lipid protein transfer 1 0.05 Archaeplastida
Solyc03g005200.3.1 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Solyc03g005210.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc09g065430.4.1 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Solyc09g082280.3.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Solyc09g082290.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e001521_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e005959_P003 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Zm00001e011463_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e032912_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e038813_P001 No alias xylogen-type arabinogalactan protein 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0035434 copper ion transmembrane transport IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 43 131
No external refs found!