LOC_Os03g13300.1


Description : glutamate decarboxylase


Gene families : OG0000738 (Archaeplastida) Phylogenetic Tree(s): OG0000738_tree ,
OG_05_0001028 (LandPlants) Phylogenetic Tree(s): OG_05_0001028_tree ,
OG_06_0001000 (SeedPlants) Phylogenetic Tree(s): OG_06_0001000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g13300.1
Cluster HCCA: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00142920 evm_27.TU.AmTr_v1... Amino acid metabolism.biosynthesis.glutamate... 0.07 Archaeplastida
AMTR_s00024p00151670 evm_27.TU.AmTr_v1... Amino acid metabolism.biosynthesis.glutamate... 0.03 Archaeplastida
AT1G65960 GAD2 glutamate decarboxylase 2 0.02 Archaeplastida
AT2G02010 GAD4 glutamate decarboxylase 4 0.03 Archaeplastida
AT5G17330 GAD, GAD1 glutamate decarboxylase 0.03 Archaeplastida
GSVIVT01000391001 No alias Amino acid metabolism.biosynthesis.glutamate... 0.03 Archaeplastida
GSVIVT01011564001 No alias Amino acid metabolism.biosynthesis.glutamate... 0.04 Archaeplastida
Gb_33200 No alias glutamate decarboxylase 0.02 Archaeplastida
LOC_Os03g51080.1 No alias glutamate decarboxylase 0.05 Archaeplastida
LOC_Os08g36320.1 No alias glutamate decarboxylase 0.03 Archaeplastida
MA_102154g0010 No alias Glutamate decarboxylase 4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_154590g0020 No alias glutamate decarboxylase 0.01 Archaeplastida
MA_1610g0010 No alias glutamate decarboxylase 0.02 Archaeplastida
Pp3c14_21530V3.1 No alias glutamate decarboxylase 0.01 Archaeplastida
Pp3c8_7810V3.1 No alias glutamate decarboxylase 4 0.02 Archaeplastida
Solyc01g005000.3.1 No alias glutamate decarboxylase 0.03 Archaeplastida
Solyc03g098240.3.1 No alias glutamate decarboxylase 0.03 Archaeplastida
Solyc04g025530.3.1 No alias glutamate decarboxylase 0.05 Archaeplastida
Solyc11g011920.2.1 No alias glutamate decarboxylase 0.03 Archaeplastida
Zm00001e007985_P001 No alias glutamate decarboxylase 0.03 Archaeplastida
Zm00001e038628_P001 No alias Glutamate decarboxylase 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016831 carboxy-lyase activity IEA Interproscan
BP GO:0019752 carboxylic acid metabolic process IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002129 PyrdxlP-dep_de-COase 33 381
No external refs found!