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  5. LOC_Os03g22580.2

LOC_Os03g22580.2


Description : no hits & (original description: none)


Gene families : OG0001380 (Archaeplastida) Phylogenetic Tree(s): OG0001380_tree ,
OG_05_0001320 (LandPlants) Phylogenetic Tree(s): OG_05_0001320_tree ,
OG_06_0001504 (SeedPlants) Phylogenetic Tree(s): OG_06_0001504_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g22580.2
Cluster HCCA: Cluster_329

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00195320 evm_27.TU.AmTr_v1... No description available 0.07 Archaeplastida
AT1G02990 No alias BEST Arabidopsis thaliana protein match is: CW-type Zinc... 0.06 Archaeplastida
AT3G62900 No alias CW-type Zinc Finger 0.03 Archaeplastida
GSVIVT01010964001 No alias No description available 0.03 Archaeplastida
GSVIVT01017765001 No alias No description available 0.08 Archaeplastida
Gb_16688 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_891272g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_939848g0010 No alias No annotation 0.02 Archaeplastida
Mp7g19200.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c9_25870V3.1 No alias CW-type Zinc Finger 0.06 Archaeplastida
Smo426541 No alias No description available 0.02 Archaeplastida
Solyc01g067600.3.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc09g074670.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e035816_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR011124 Znf_CW 26 71
No external refs found!