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  5. LOC_Os03g38800.1

LOC_Os03g38800.1


Description : AAA-ATPase At5g17740 OS=Arabidopsis thaliana (sp|q9fn77|aatpg_arath : 354.0)


Gene families : OG0000095 (Archaeplastida) Phylogenetic Tree(s): OG0000095_tree ,
OG_05_0015585 (LandPlants) Phylogenetic Tree(s): OG_05_0015585_tree ,
OG_06_0015281 (SeedPlants) Phylogenetic Tree(s): OG_06_0015281_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g38800.1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00241930 evm_27.TU.AmTr_v1... Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00019p00244740 evm_27.TU.AmTr_v1... Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00036p00176790 evm_27.TU.AmTr_v1... Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.05 Archaeplastida
AT2G18193 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 Archaeplastida
AT3G28510 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Archaeplastida
AT3G28600 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Archaeplastida
AT3G50930 BCS1 cytochrome BC1 synthesis 0.04 Archaeplastida
AT5G40000 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Archaeplastida
GSVIVT01001352001 No alias AAA-ATPase At4g30250 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01023336001 No alias AAA-ATPase At3g28600 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01027397001 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01029545001 No alias AAA-ATPase At3g50940 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01032553001 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01032554001 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01032558001 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_16063 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_27546 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_27548 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_34238 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g19260.1 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os01g45450.1 No alias AAA-ATPase At5g17740 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os03g02330.1 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.07 Archaeplastida
LOC_Os09g27340.1 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os12g24320.1 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os12g28137.1 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os12g28177.1 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os12g28550.1 No alias AAA-ATPase At5g40000 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os12g28590.1 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os12g44190.1 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.06 Archaeplastida
MA_10430798g0010 No alias AAA-ATPase At4g30250 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_10430798g0020 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10435468g0010 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_56516g0010 No alias AAA-ATPase At3g28570, mitochondrial OS=Arabidopsis... 0.02 Archaeplastida
Mp7g18570.1 No alias AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c1_22130V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida
Solyc02g062550.3.1 No alias Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.02 Archaeplastida
Solyc02g087540.3.1 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc03g033790.4.1 No alias Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.06 Archaeplastida
Solyc03g033840.4.1 No alias Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.05 Archaeplastida
Solyc03g082640.3.1 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc10g007280.4.1 No alias Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e003357_P001 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e003358_P001 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e008810_P001 No alias AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e011416_P001 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e012527_P001 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e013138_P001 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e027961_P001 No alias AAA-ATPase At3g50940 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e033043_P001 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e038158_P001 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025753 AAA_N_dom 56 162
IPR003959 ATPase_AAA_core 385 441
IPR003959 ATPase_AAA_core 283 349
No external refs found!