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  5. LOC_Os03g43730.1

LOC_Os03g43730.1


Description : CPP1-like transcription factor


Gene families : OG0000498 (Archaeplastida) Phylogenetic Tree(s): OG0000498_tree ,
OG_05_0001037 (LandPlants) Phylogenetic Tree(s): OG_05_0001037_tree ,
OG_06_0001586 (SeedPlants) Phylogenetic Tree(s): OG_06_0001586_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g43730.1
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00271710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.CPP1-like... 0.04 Archaeplastida
AT4G14770 TCX2, ATTCX2 TESMIN/TSO1-like CXC 2 0.07 Archaeplastida
Cre08.g361400 No alias RNA biosynthesis.transcriptional activation.CPP1-like... 0.02 Archaeplastida
Cre11.g481800 No alias RNA biosynthesis.transcriptional activation.CPP1-like... 0.01 Archaeplastida
GSVIVT01017242001 No alias RNA biosynthesis.transcriptional activation.CPP1-like... 0.02 Archaeplastida
GSVIVT01018021001 No alias RNA biosynthesis.transcriptional activation.CPP1-like... 0.1 Archaeplastida
GSVIVT01021837001 No alias RNA biosynthesis.transcriptional activation.CPP1-like... 0.04 Archaeplastida
GSVIVT01035818001 No alias RNA biosynthesis.transcriptional activation.CPP1-like... 0.06 Archaeplastida
Gb_38828 No alias CPP1-like transcription factor 0.05 Archaeplastida
LOC_Os12g41230.2 No alias CPP1-like transcription factor 0.03 Archaeplastida
MA_15033g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_33846g0010 No alias CPP1-like transcription factor 0.08 Archaeplastida
Mp2g11520.1 No alias CPP1-like transcription factor 0.03 Archaeplastida
Pp3c20_9210V3.1 No alias Tesmin/TSO1-like CXC domain-containing protein 0.02 Archaeplastida
Pp3c9_7400V3.1 No alias Tesmin/TSO1-like CXC domain-containing protein 0.02 Archaeplastida
Smo443191 No alias RNA biosynthesis.transcriptional activation.CPP1-like... 0.03 Archaeplastida
Solyc09g082500.4.1 No alias CPP1-like transcription factor 0.06 Archaeplastida
Zm00001e003195_P002 No alias CPP1-like transcription factor 0.04 Archaeplastida
Zm00001e019745_P001 No alias CPP1-like transcription factor 0.02 Archaeplastida
Zm00001e032916_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006270 DNA replication initiation IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005172 CRC 547 583
IPR005172 CRC 462 497
No external refs found!