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  5. LOC_Os03g52670.1

LOC_Os03g52670.1


Description : GLABRA2 expression modulator OS=Arabidopsis thaliana (sp|q8s8f8|gem_arath : 209.0)


Gene families : OG0000398 (Archaeplastida) Phylogenetic Tree(s): OG0000398_tree ,
OG_05_0000750 (LandPlants) Phylogenetic Tree(s): OG_05_0000750_tree ,
OG_06_0020102 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g52670.1
Cluster HCCA: Cluster_309

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00120390 evm_27.TU.AmTr_v1... GEM-like protein 5 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT4G01600 No alias GRAM domain family protein 0.04 Archaeplastida
AT5G08350 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.05 Archaeplastida
AT5G13200 No alias GRAM domain family protein 0.04 Archaeplastida
AT5G23350 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.04 Archaeplastida
AT5G23360 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.04 Archaeplastida
GSVIVT01000958001 No alias GEM-like protein 5 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01012919001 No alias GEM-like protein 4 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01034412001 No alias GEM-like protein 4 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_00888 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_22682 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g42440.1 No alias Putative GEM-like protein 8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os04g44510.1 No alias GEM-like protein 4 OS=Arabidopsis thaliana... 0.07 Archaeplastida
LOC_Os12g29400.1 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_10255128g0010 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_2965641g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp7g17580.1 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c22_5280V3.1 No alias GRAM domain family protein 0.02 Archaeplastida
Pp3c9_17450V3.1 No alias FH interacting protein 1 0.02 Archaeplastida
Smo85701 No alias GEM-like protein 5 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc03g098660.3.1 No alias GEM-like protein 4 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc04g008960.3.1 No alias Putative GEM-like protein 8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc08g078510.3.1 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc11g011590.2.1 No alias Putative GEM-like protein 8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e015212_P001 No alias GEM-like protein 6 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e023068_P001 No alias GEM-like protein 4 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e039556_P001 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e041280_P002 No alias GEM-like protein 4 OS=Arabidopsis thaliana... 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
MF GO:0008373 sialyltransferase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004182 GRAM 119 245
No external refs found!