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  5. LOC_Os03g55090.1

LOC_Os03g55090.1


Description : Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic OS=Solanum tuberosum (sp|p53535|phsl2_soltu : 719.0) & Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase(50.2.4 : 617.6)


Gene families : OG0001155 (Archaeplastida) Phylogenetic Tree(s): OG0001155_tree ,
OG_05_0002462 (LandPlants) Phylogenetic Tree(s): OG_05_0002462_tree ,
OG_06_0003019 (SeedPlants) Phylogenetic Tree(s): OG_06_0003019_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g55090.1
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00110p00094310 evm_27.TU.AmTr_v1... Enzyme classification.EC_2 transferases.EC_2.4... 0.02 Archaeplastida
AT3G46970 PHS2, ATPHS2 alpha-glucan phosphorylase 2 0.03 Archaeplastida
Cre07.g336950 No alias Carbohydrate metabolism.starch... 0.02 Archaeplastida
Cre12.g552200 No alias Carbohydrate metabolism.starch... 0.01 Archaeplastida
GSVIVT01011504001 No alias Alpha-1,4 glucan phosphorylase L-1 isozyme,... 0.02 Archaeplastida
Gb_38925 No alias cytosolic alpha-glucan phosphorylase 0.02 Archaeplastida
MA_10437129g0010 No alias cytosolic alpha-glucan phosphorylase 0.02 Archaeplastida
MA_121279g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_14581g0010 No alias plastidial alpha-glucan phosphorylase 0.02 Archaeplastida
Mp3g02670.1 No alias cytosolic alpha-glucan phosphorylase 0.02 Archaeplastida
Pp3c6_24700V3.1 No alias Glycosyl transferase, family 35 0.02 Archaeplastida
Zm00001e005733_P001 No alias plastidial alpha-glucan phosphorylase 0.08 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0008184 glycogen phosphorylase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
MF GO:2001070 starch binding IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000811 Glyco_trans_35 124 585
IPR000811 Glyco_trans_35 1 102
No external refs found!