LOC_Os04g13210.1

Description : subfamily ABCC transporter

Gene families : OG0000058 (Archaeplastida) Phylogenetic Tree(s): OG0000058_tree ,
OG_05_0001822 (LandPlants) Phylogenetic Tree(s): OG_05_0001822_tree ,
OG_06_0004319 (SeedPlants) Phylogenetic Tree(s): OG_06_0004319_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os04g13210.1
Cluster	HCCA: Cluster_157

Target	Alias	Description	ECC score	Gene Family Method
AT3G62700	MRP10, ATMRP10, ABCC14	multidrug resistance-associated protein 10	0.03	Archaeplastida
Cre03.g174050	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Cre07.g325761	No alias	ABC transporter C family member 2 OS=Arabidopsis thaliana	0.02	Archaeplastida
GSVIVT01019475001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01021595001	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
MA_10436190g0020	No alias	ABC transporter C family member 10 OS=Arabidopsis...	0.04	Archaeplastida
MA_10436190g0030	No alias	ABC transporter C family member 10 OS=Arabidopsis...	0.03	Archaeplastida
MA_10436190g0040	No alias	ABC transporter C family member 10 OS=Arabidopsis...	0.02	Archaeplastida
MA_211762g0010	No alias	ABC transporter C family member 14 OS=Arabidopsis...	0.03	Archaeplastida
MA_556337g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_602830g0010	No alias	ABC transporter C family member 10 OS=Arabidopsis...	0.02	Archaeplastida
MA_607295g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_629244g0010	No alias	subfamily ABCC transporter	0.05	Archaeplastida
Mp1g23430.1	No alias	subfamily ABCC transporter	0.02	Archaeplastida
Mp5g02230.1	No alias	subfamily ABCC transporter	0.02	Archaeplastida
Mp7g13860.1	No alias	subfamily ABCC transporter	0.02	Archaeplastida
Smo144775	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo163776	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo402326	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo93699	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo94	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
Solyc09g075020.3.1	No alias	subfamily ABCC transporter	0.05	Archaeplastida
Solyc10g024420.3.1	No alias	subfamily ABCC transporter	0.03	Archaeplastida
Zm00001e038918_P002	No alias	subfamily ABCC transporter	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043492	ATPase activity, coupled to movement of substances	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	Neighborhood
MF	GO:0004568	chitinase activity	IEP	Neighborhood
BP	GO:0006022	aminoglycan metabolic process	IEP	Neighborhood
BP	GO:0006026	aminoglycan catabolic process	IEP	Neighborhood
BP	GO:0006030	chitin metabolic process	IEP	Neighborhood
BP	GO:0006032	chitin catabolic process	IEP	Neighborhood
BP	GO:0006040	amino sugar metabolic process	IEP	Neighborhood
BP	GO:0006732	coenzyme metabolic process	IEP	Neighborhood
BP	GO:0006733	oxidoreduction coenzyme metabolic process	IEP	Neighborhood
MF	GO:0008061	chitin binding	IEP	Neighborhood
MF	GO:0008987	quinolinate synthetase A activity	IEP	Neighborhood
BP	GO:0009108	coenzyme biosynthetic process	IEP	Neighborhood
BP	GO:0009308	amine metabolic process	IEP	Neighborhood
BP	GO:0009435	NAD biosynthetic process	IEP	Neighborhood
BP	GO:0009690	cytokinin metabolic process	IEP	Neighborhood
MF	GO:0010181	FMN binding	IEP	Neighborhood
MF	GO:0010333	terpene synthase activity	IEP	Neighborhood
BP	GO:0010817	regulation of hormone levels	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Neighborhood
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Neighborhood
MF	GO:0016829	lyase activity	IEP	Neighborhood
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Neighborhood
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Neighborhood
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Neighborhood
MF	GO:0019139	cytokinin dehydrogenase activity	IEP	Neighborhood
BP	GO:0019359	nicotinamide nucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	Neighborhood
BP	GO:0019363	pyridine nucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0019674	NAD metabolic process	IEP	Neighborhood
BP	GO:0034754	cellular hormone metabolic process	IEP	Neighborhood
BP	GO:0042445	hormone metabolic process	IEP	Neighborhood
BP	GO:0042737	drug catabolic process	IEP	Neighborhood
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Neighborhood
BP	GO:0046348	amino sugar catabolic process	IEP	Neighborhood
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	Neighborhood
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
MF	GO:0050662	coenzyme binding	IEP	Neighborhood
BP	GO:0051188	cofactor biosynthetic process	IEP	Neighborhood
MF	GO:0051536	iron-sulfur cluster binding	IEP	Neighborhood
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEP	Neighborhood
MF	GO:0051540	metal cluster binding	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	Neighborhood
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:1901071	glucosamine-containing compound metabolic process	IEP	Neighborhood
BP	GO:1901072	glucosamine-containing compound catabolic process	IEP	Neighborhood
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Neighborhood
BP	GO:1901565	organonitrogen compound catabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	6	263
IPR011527	ABC1_TM_dom	653	891
IPR003439	ABC_transporter-like	361	494
IPR003439	ABC_transporter-like	982	1130

External Links

No external refs found!

LOC_Os04g13210.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation