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  5. LOC_Os04g14410.1

LOC_Os04g14410.1


Description : no hits & (original description: none)


Gene families : OG0003210 (Archaeplastida) Phylogenetic Tree(s): OG0003210_tree ,
OG_05_0001969 (LandPlants) Phylogenetic Tree(s): OG_05_0001969_tree ,
OG_06_0001698 (SeedPlants) Phylogenetic Tree(s): OG_06_0001698_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g14410.1
Cluster HCCA: Cluster_257

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00016550 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00049p00090200 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT1G21560 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 Archaeplastida
Pp3c8_15980V3.1 No alias No annotation 0.02 Archaeplastida
Smo420539 No alias No description available 0.01 Archaeplastida
Solyc04g057970.3.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e037290_P007 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006338 chromatin remodeling IEP Neighborhood
BP GO:0006354 DNA-templated transcription, elongation IEP Neighborhood
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006570 tyrosine metabolic process IEP Neighborhood
BP GO:0006571 tyrosine biosynthetic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
CC GO:0008023 transcription elongation factor complex IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP Neighborhood
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
CC GO:0016593 Cdc73/Paf1 complex IEP Neighborhood
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
CC GO:0031262 Ndc80 complex IEP Neighborhood
MF GO:0031491 nucleosome binding IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0043044 ATP-dependent chromatin remodeling IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP Neighborhood
MF GO:0061505 DNA topoisomerase II activity IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!