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  5. LOC_Os04g32620.1

LOC_Os04g32620.1


Description : transcription factor (ERF)


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000007 (SeedPlants) Phylogenetic Tree(s): OG_06_0000007_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g32620.1
Cluster HCCA: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00268460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00009p00147970 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00009p00268560 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00010p00194910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00016p00092590 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00016p00238800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
AMTR_s00019p00232450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00025p00218200 evm_27.TU.AmTr_v1... Ethylene-responsive transcription factor ERF015... 0.03 Archaeplastida
AMTR_s00025p00249140 evm_27.TU.AmTr_v1... Cell wall.cutin and suberin.biosynthesis... 0.02 Archaeplastida
AMTR_s00026p00180130 evm_27.TU.AmTr_v1... Ethylene-responsive transcription factor ERF084... 0.02 Archaeplastida
AMTR_s00034p00206140 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00039p00088760 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00040p00180260 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00058p00066390 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.02 Archaeplastida
AMTR_s00069p00132820 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.03 Archaeplastida
AMTR_s00077p00141890 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
AMTR_s00095p00096190 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00129p00112550 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AT1G06160 ORA59 octadecanoid-responsive Arabidopsis AP2/ERF 59 0.05 Archaeplastida
AT1G43160 RAP2.6 related to AP2 6 0.03 Archaeplastida
AT1G71130 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT1G74930 ORA47 Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT2G25820 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT2G31230 ATERF15, ERF15 ethylene-responsive element binding factor 15 0.05 Archaeplastida
AT2G36450 HRD Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT2G47520 HRE2 Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT3G23220 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT3G23230 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT4G11140 CRF1 cytokinin response factor 1 0.03 Archaeplastida
AT4G17490 ERF-6-6, ERF6, ATERF6 ethylene responsive element binding factor 6 0.03 Archaeplastida
AT4G31060 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT5G13910 LEP Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT5G18450 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT5G50080 ERF110 ethylene response factor 110 0.02 Archaeplastida
AT5G51190 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
GSVIVT01001089001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01013917001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01013923001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01013931001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01013934001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01015037001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01017572001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01031387001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01031747001 No alias Alpha-amylase type B isozyme OS=Hordeum vulgare 0.02 Archaeplastida
GSVIVT01032983001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01036201001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01036228001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
Gb_01215 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_01217 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_02790 No alias transcription factor (ERF) 0.04 Archaeplastida
Gb_03783 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_07475 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_09495 No alias transcription factor (ERF). transcription factor (ERN1) 0.03 Archaeplastida
Gb_11793 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_11856 No alias Ethylene-responsive transcription factor RAP2-3... 0.02 Archaeplastida
Gb_16683 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_17122 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_17210 No alias transcription factor (DREB). C2H2 zinc finger... 0.02 Archaeplastida
Gb_17212 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_23321 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_23870 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_32532 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_34849 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_35474 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_35633 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_41020 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_41836 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os01g12440.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os03g64260.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os05g34730.1 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os06g11940.1 No alias Ethylene-responsive transcription factor ERF017... 0.04 Archaeplastida
LOC_Os09g11460.1 No alias Ethylene-responsive transcription factor ERF073... 0.05 Archaeplastida
LOC_Os09g11480.2 No alias Ethylene-responsive transcription factor ERF112... 0.07 Archaeplastida
LOC_Os11g06770.2 No alias transcription factor (ERF) 0.05 Archaeplastida
LOC_Os11g13840.1 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_10266433g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_10427743g0020 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10432141g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_116185g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_137148g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_16778g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_179692g0020 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_18454g0020 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_203191g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_27309g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_4032g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_40338g0010 No alias Ethylene-responsive transcription factor ERF012... 0.02 Archaeplastida
MA_5805979g0010 No alias Ethylene-responsive transcription factor 1A... 0.03 Archaeplastida
MA_5979847g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_647924g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_81029g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_83118g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_8384767g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_912855g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
Mp1g20040.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Pp3c11_23290V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c11_24520V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c12_25330V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c16_13280V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c17_10170V3.1 No alias erf domain protein 9 0.02 Archaeplastida
Pp3c1_5010V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c1_7800V3.1 No alias ethylene responsive element binding factor 1 0.02 Archaeplastida
Pp3c21_13130V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c26_13260V3.1 No alias ethylene responsive element binding factor 1 0.02 Archaeplastida
Pp3c27_6030V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c3_33930V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c4_2530V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c5_22280V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c5_810V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c6_19350V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Smo104980 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
Smo409196 No alias External stimuli response.biotic... 0.03 Archaeplastida
Solyc01g009440.3.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc02g067020.1.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.02 Archaeplastida
Solyc02g077360.1.1 No alias transcription factor (ERF) 0.06 Archaeplastida
Solyc02g077370.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc03g005500.1.1 No alias transcription factor (ERF). transcription factor (DREB) 0.04 Archaeplastida
Solyc03g005510.2.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc03g118190.4.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc04g071770.3.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc05g013540.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc05g052030.1.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc08g066660.1.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc08g078170.1.1 No alias transcription factor (ERF) 0.05 Archaeplastida
Solyc08g078180.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc09g089910.1.1 No alias transcription factor (ERF). transcription factor (DREB) 0.03 Archaeplastida
Solyc09g089930.3.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Zm00001e000400_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e000611_P001 No alias Ethylene-responsive transcription factor ERF073... 0.03 Archaeplastida
Zm00001e003707_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e006604_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e006753_P003 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e008306_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e013685_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e014415_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e014659_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e015312_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e015429_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e019026_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e019159_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e019837_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e023224_P001 No alias transcription factor (DREB) 0.04 Archaeplastida
Zm00001e023816_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e023870_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e025999_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e029041_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e030090_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e032032_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e033072_P001 No alias transcription factor (ERF). transcription factor (ERN1) 0.03 Archaeplastida
Zm00001e034242_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e034661_P001 No alias Ethylene-responsive transcription factor ERF115... 0.02 Archaeplastida
Zm00001e037241_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e038525_P001 No alias Ethylene-responsive transcription factor ERF013... 0.02 Archaeplastida
Zm00001e040124_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e041288_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e041781_P001 No alias transcription factor (DREB) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Neighborhood
MF GO:0004451 isocitrate lyase activity IEP Neighborhood
MF GO:0004474 malate synthase activity IEP Neighborhood
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Neighborhood
CC GO:0005779 integral component of peroxisomal membrane IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006097 glyoxylate cycle IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016559 peroxisome fission IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016832 aldehyde-lyase activity IEP Neighborhood
MF GO:0016833 oxo-acid-lyase activity IEP Neighborhood
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Neighborhood
BP GO:0017148 negative regulation of translation IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0030597 RNA glycosylase activity IEP Neighborhood
MF GO:0030598 rRNA N-glycosylase activity IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Neighborhood
CC GO:0031300 intrinsic component of organelle membrane IEP Neighborhood
CC GO:0031301 integral component of organelle membrane IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
MF GO:0033897 ribonuclease T2 activity IEP Neighborhood
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044438 microbody part IEP Neighborhood
CC GO:0044439 peroxisomal part IEP Neighborhood
BP GO:0046487 glyoxylate metabolic process IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0048285 organelle fission IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0051248 negative regulation of protein metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0140102 catalytic activity, acting on a rRNA IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 66 115
No external refs found!