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  5. LOC_Os04g41710.1

LOC_Os04g41710.1


Description : no hits & (original description: none)


Gene families : OG0000610 (Archaeplastida) Phylogenetic Tree(s): OG0000610_tree ,
OG_05_0002309 (LandPlants) Phylogenetic Tree(s): OG_05_0002309_tree ,
OG_06_0001279 (SeedPlants) Phylogenetic Tree(s): OG_06_0001279_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g41710.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00042p00185900 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00141p00085330 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00141p00087130 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00141p00087190 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00264p00012960 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT1G80240 No alias Protein of unknown function, DUF642 0.05 Archaeplastida
AT4G32460 No alias Protein of unknown function, DUF642 0.03 Archaeplastida
AT5G11420 No alias Protein of unknown function, DUF642 0.03 Archaeplastida
GSVIVT01033098001 No alias No description available 0.03 Archaeplastida
GSVIVT01033286001 No alias1.86 No description available 0.03 Archaeplastida
Gb_14930 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os01g55190.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g59300.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g41750.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g41770.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10434741g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_169757g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_4501g0020 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_54830g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_770477g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_9589g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc02g070540.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc03g120040.3.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc04g015610.3.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc06g067910.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc08g067030.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc12g042930.2.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e007710_P003 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e007711_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e007713_P001 No alias no hits & (original description: none) 0.09 Archaeplastida
Zm00001e007714_P001 No alias no hits & (original description: none) 0.11 Archaeplastida
Zm00001e013973_P001 No alias no hits & (original description: none) 0.1 Archaeplastida
Zm00001e019773_P002 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e020676_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e041141_P001 No alias no hits & (original description: none) 0.12 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003872 6-phosphofructokinase activity IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008443 phosphofructokinase activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
MF GO:0019200 carbohydrate kinase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006946 DUF642 195 359
IPR006946 DUF642 26 184
No external refs found!