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  5. LOC_Os04g44200.1

LOC_Os04g44200.1


Description : PsbQ-like protein 3, chloroplastic OS=Arabidopsis thaliana (sp|q2v4b2|pql3_arath : 104.0)


Gene families : OG0001933 (Archaeplastida) Phylogenetic Tree(s): OG0001933_tree ,
OG_05_0012832 (LandPlants) Phylogenetic Tree(s): OG_05_0012832_tree ,
OG_06_0012829 (SeedPlants) Phylogenetic Tree(s): OG_06_0012829_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g44200.1
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00134700 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00098p00154060 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.05 Archaeplastida
AMTR_s00098p00157610 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.04 Archaeplastida
AT2G01918 PQL3 PsbQ-like 3 0.04 Archaeplastida
AT3G01440 PQL1, PQL2 PsbQ-like 1 0.11 Archaeplastida
AT4G21280 PSBQA, PSBQ-1, PSBQ photosystem II subunit QA 0.08 Archaeplastida
Cre08.g372450 No alias Oxygen-evolving enhancer protein 3, chloroplastic... 0.03 Archaeplastida
GSVIVT01002809001 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.07 Archaeplastida
GSVIVT01014586001 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.1 Archaeplastida
Gb_04734 No alias component PsbQ of PS-II oxygen-evolving center 0.02 Archaeplastida
Mp4g07510.1 No alias component PsbQ of PS-II oxygen-evolving center 0.02 Archaeplastida
Pp3c13_6570V3.1 No alias photosystem II subunit QA 0.02 Archaeplastida
Pp3c3_2620V3.1 No alias photosystem II subunit QA 0.04 Archaeplastida
Smo106248 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.03 Archaeplastida
Solyc02g079950.3.1 No alias component PsbQ of PS-II oxygen-evolving center 0.03 Archaeplastida
Solyc10g006530.4.1 No alias Photosynthetic NDH subunit of lumenal location 3,... 0.07 Archaeplastida
Zm00001e007556_P001 No alias PsbQ-like protein 3, chloroplastic OS=Arabidopsis... 0.13 Archaeplastida
Zm00001e010513_P001 No alias component PsbQ of PS-II oxygen-evolving center 0.05 Archaeplastida
Zm00001e032657_P001 No alias component PnsL3/PQL2 of NDH lumen subcomplex L 0.08 Archaeplastida
Zm00001e035180_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
CC GO:0009512 cytochrome b6f complex IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
CC GO:0070069 cytochrome complex IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR008797 PSII_PsbQ 73 184
No external refs found!