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  5. LOC_Os04g50120.1

LOC_Os04g50120.1


Description : transcription factor (PLATZ)


Gene families : OG0000197 (Archaeplastida) Phylogenetic Tree(s): OG0000197_tree ,
OG_05_0000533 (LandPlants) Phylogenetic Tree(s): OG_05_0000533_tree ,
OG_06_0001021 (SeedPlants) Phylogenetic Tree(s): OG_06_0001021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g50120.1
Cluster HCCA: Cluster_332

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00211460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.04 Archaeplastida
AMTR_s00008p00208550 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.02 Archaeplastida
AMTR_s00022p00039680 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.02 Archaeplastida
AMTR_s00033p00166000 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.03 Archaeplastida
AT1G21000 No alias PLATZ transcription factor family protein 0.02 Archaeplastida
AT1G43000 No alias PLATZ transcription factor family protein 0.04 Archaeplastida
AT1G76590 No alias PLATZ transcription factor family protein 0.03 Archaeplastida
AT2G12646 No alias PLATZ transcription factor family protein 0.03 Archaeplastida
AT3G60670 No alias PLATZ transcription factor family protein 0.04 Archaeplastida
AT4G17900 No alias PLATZ transcription factor family protein 0.03 Archaeplastida
AT5G46710 No alias PLATZ transcription factor family protein 0.02 Archaeplastida
GSVIVT01012869001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.04 Archaeplastida
GSVIVT01013149001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.04 Archaeplastida
GSVIVT01031446001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.02 Archaeplastida
Gb_29488 No alias transcription factor (PLATZ) 0.03 Archaeplastida
LOC_Os02g46610.1 No alias transcription factor (PLATZ) 0.04 Archaeplastida
LOC_Os06g41930.2 No alias transcription factor (PLATZ) 0.05 Archaeplastida
LOC_Os10g42410.3 No alias transcription factor (PLATZ) 0.04 Archaeplastida
MA_10310g0010 No alias transcription factor (PLATZ) 0.03 Archaeplastida
MA_4953568g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_9760264g0010 No alias transcription factor (PLATZ) 0.03 Archaeplastida
Mp1g07250.1 No alias transcription factor (PLATZ) 0.02 Archaeplastida
Pp3c13_4760V3.1 No alias PLATZ transcription factor family protein 0.03 Archaeplastida
Pp3c15_23190V3.1 No alias PLATZ transcription factor family protein 0.04 Archaeplastida
Pp3c3_3180V3.1 No alias PLATZ transcription factor family protein 0.04 Archaeplastida
Pp3c4_30530V3.1 No alias PLATZ transcription factor family protein 0.03 Archaeplastida
Pp3c8_4000V3.1 No alias PLATZ transcription factor family protein 0.02 Archaeplastida
Smo425306 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.02 Archaeplastida
Solyc06g061240.4.1 No alias transcription factor (PLATZ) 0.04 Archaeplastida
Solyc07g007320.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc08g005100.3.1 No alias transcription factor (PLATZ) 0.05 Archaeplastida
Solyc08g076860.3.1 No alias transcription factor (PLATZ) 0.04 Archaeplastida
Solyc12g010470.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e002426_P001 No alias transcription factor (PLATZ) 0.04 Archaeplastida
Zm00001e007100_P003 No alias transcription factor (PLATZ) 0.05 Archaeplastida
Zm00001e013748_P001 No alias transcription factor (PLATZ) 0.03 Archaeplastida
Zm00001e041404_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006734 DUF597 89 160
No external refs found!