LOC_Os04g52840.1

Description : cold-responsive protein kinase (CRPK)

Gene families : OG0000111 (Archaeplastida) Phylogenetic Tree(s): OG0000111_tree ,
OG_05_0000062 (LandPlants) Phylogenetic Tree(s): OG_05_0000062_tree ,
OG_06_0000573 (SeedPlants) Phylogenetic Tree(s): OG_06_0000573_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os04g52840.1
Cluster	HCCA: Cluster_309

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00029p00237920	evm_27.TU.AmTr_v1...	Enzyme classification.EC_2 transferases.EC_2.7...	0.04	Archaeplastida
AT1G53430	No alias	Leucine-rich repeat transmembrane protein kinase	0.05	Archaeplastida
AT1G56120	No alias	Leucine-rich repeat transmembrane protein kinase	0.03	Archaeplastida
AT1G56130	No alias	Leucine-rich repeat transmembrane protein kinase	0.03	Archaeplastida
AT1G56140	No alias	Leucine-rich repeat transmembrane protein kinase	0.03	Archaeplastida
AT1G56145	No alias	Leucine-rich repeat transmembrane protein kinase	0.04	Archaeplastida
AT3G09010	No alias	Protein kinase superfamily protein	0.03	Archaeplastida
AT3G14840	No alias	Leucine-rich repeat transmembrane protein kinase	0.04	Archaeplastida
GSVIVT01006444001	No alias	Probable LRR receptor-like serine/threonine-protein...	0.06	Archaeplastida
GSVIVT01013612001	No alias	Protein modification.phosphorylation.TKL kinase...	0.07	Archaeplastida
GSVIVT01014110001	No alias	Protein modification.phosphorylation.TKL kinase...	0.05	Archaeplastida
GSVIVT01014138001	No alias	Protein modification.phosphorylation.TKL kinase...	0.04	Archaeplastida
GSVIVT01014150001	No alias	Protein modification.phosphorylation.TKL kinase...	0.05	Archaeplastida
GSVIVT01014221001	No alias	External stimuli response.temperature.CRPK...	0.04	Archaeplastida
GSVIVT01016293001	No alias	Cold-responsive protein kinase 1 OS=Arabidopsis thaliana	0.04	Archaeplastida
GSVIVT01020456001	No alias	External stimuli response.temperature.CRPK...	0.05	Archaeplastida
GSVIVT01021285001	No alias	Protein modification.phosphorylation.TKL kinase...	0.03	Archaeplastida
GSVIVT01021289001	No alias	Protein modification.phosphorylation.TKL kinase...	0.04	Archaeplastida
GSVIVT01021291001	No alias	Protein modification.phosphorylation.TKL kinase...	0.04	Archaeplastida
GSVIVT01029718001	No alias	Protein modification.phosphorylation.TKL kinase...	0.02	Archaeplastida
Gb_38580	No alias	Probable LRR receptor-like serine/threonine-protein...	0.04	Archaeplastida
LOC_Os04g52600.1	No alias	protein kinase (LRR-VIII-2)	0.04	Archaeplastida
LOC_Os05g17604.1	No alias	protein kinase (LRR-VIII-2)	0.04	Archaeplastida
LOC_Os06g46330.1	No alias	cold-responsive protein kinase (CRPK)	0.05	Archaeplastida
LOC_Os08g10290.1	No alias	protein kinase (LRR-VIII-2)	0.04	Archaeplastida
Mp1g21730.1	No alias	Probable LRR receptor-like serine/threonine-protein...	0.03	Archaeplastida
Pp3c16_17510V3.1	No alias	Leucine-rich repeat transmembrane protein kinase	0.04	Archaeplastida
Pp3c23_21020V3.1	No alias	Leucine-rich repeat transmembrane protein kinase	0.02	Archaeplastida
Pp3c4_140V3.1	No alias	Leucine-rich repeat transmembrane protein kinase	0.03	Archaeplastida
Smo176397	No alias	Probable LRR receptor-like serine/threonine-protein...	0.02	Archaeplastida
Solyc02g071820.4.1	No alias	protein kinase (LRR-VIII-2)	0.03	Archaeplastida
Solyc02g071870.4.1	No alias	Probable LRR receptor-like serine/threonine-protein...	0.03	Archaeplastida
Solyc02g071880.3.1	No alias	protein kinase (LRR-VIII-2)	0.03	Archaeplastida
Solyc02g078530.3.1	No alias	Cold-responsive protein kinase 1 OS=Arabidopsis thaliana...	0.07	Archaeplastida
Solyc03g005960.3.1	No alias	Probable LRR receptor-like serine/threonine-protein...	0.02	Archaeplastida
Solyc07g055810.3.1	No alias	protein kinase (LRR-VIII-2)	0.05	Archaeplastida
Solyc09g007730.4.1	No alias	Cold-responsive protein kinase 1 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Solyc10g005630.3.1	No alias	cold-responsive protein kinase (CRPK)	0.08	Archaeplastida
Solyc10g084110.2.1	No alias	Cold-responsive protein kinase 1 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Solyc12g014350.3.1	No alias	protein kinase (LRR-VIII-2)	0.03	Archaeplastida
Zm00001e003218_P001	No alias	cold-responsive protein kinase (CRPK)	0.07	Archaeplastida
Zm00001e006911_P001	No alias	cold-responsive protein kinase (CRPK)	0.07	Archaeplastida
Zm00001e014391_P002	No alias	protein kinase (LRR-VIII-2)	0.03	Archaeplastida
Zm00001e021603_P001	No alias	cold-responsive protein kinase (CRPK)	0.03	Archaeplastida
Zm00001e025162_P002	No alias	cold-responsive protein kinase (CRPK)	0.1	Archaeplastida
Zm00001e030330_P001	No alias	cold-responsive protein kinase (CRPK)	0.05	Archaeplastida
Zm00001e041659_P003	No alias	protein kinase (LRR-VIII-2)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	Neighborhood
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0005509	calcium ion binding	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0006766	vitamin metabolic process	IEP	Neighborhood
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	Neighborhood
BP	GO:0006771	riboflavin metabolic process	IEP	Neighborhood
BP	GO:0006887	exocytosis	IEP	Neighborhood
BP	GO:0006952	defense response	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
MF	GO:0008686	3,4-dihydroxy-2-butanone-4-phosphate synthase activity	IEP	Neighborhood
BP	GO:0009110	vitamin biosynthetic process	IEP	Neighborhood
BP	GO:0009231	riboflavin biosynthetic process	IEP	Neighborhood
BP	GO:0009889	regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0016042	lipid catabolic process	IEP	Neighborhood
BP	GO:0016192	vesicle-mediated transport	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0019222	regulation of metabolic process	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
BP	GO:0031323	regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
BP	GO:0032940	secretion by cell	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
BP	GO:0040008	regulation of growth	IEP	Neighborhood
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	Neighborhood
BP	GO:0042726	flavin-containing compound metabolic process	IEP	Neighborhood
BP	GO:0042727	flavin-containing compound biosynthetic process	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
CC	GO:0044448	cell cortex part	IEP	Neighborhood
BP	GO:0045927	positive regulation of growth	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
BP	GO:0046903	secretion	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0050794	regulation of cellular process	IEP	Neighborhood
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051252	regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0065007	biological regulation	IEP	Neighborhood
BP	GO:0080090	regulation of primary metabolic process	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
CC	GO:0099023	tethering complex	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001245	Ser-Thr/Tyr_kinase_cat_dom	41	307

External Links

No external refs found!

LOC_Os04g52840.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation