LOC_Os05g38270.1


Description : Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana (sp|q9fn03|uvr8_arath : 131.0)


Gene families : OG0005082 (Archaeplastida) Phylogenetic Tree(s): OG0005082_tree ,
OG_05_0004153 (LandPlants) Phylogenetic Tree(s): OG_05_0004153_tree ,
OG_06_0004501 (SeedPlants) Phylogenetic Tree(s): OG_06_0004501_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g38270.1
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01016476001 No alias Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.06 Archaeplastida
Mp7g16270.1 No alias Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc05g052950.4.1 No alias Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Solyc09g011160.4.1 No alias Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e019289_P001 No alias Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana... 0.11 Archaeplastida
Zm00001e028756_P001 No alias Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana... 0.13 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009119 ribonucleoside metabolic process IEP Neighborhood
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0042278 purine nucleoside metabolic process IEP Neighborhood
BP GO:0046128 purine ribonucleoside metabolic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901068 guanosine-containing compound metabolic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 253 327
IPR000408 Reg_chr_condens 436 484
IPR000408 Reg_chr_condens 330 378
IPR000408 Reg_chr_condens 382 433
No external refs found!