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  5. LOC_Os05g45040.1

LOC_Os05g45040.1


Description : component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0005259 (Archaeplastida) Phylogenetic Tree(s): OG0005259_tree ,
OG_05_0007732 (LandPlants) Phylogenetic Tree(s): OG_05_0007732_tree ,
OG_06_0007392 (SeedPlants) Phylogenetic Tree(s): OG_06_0007392_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g45040.1
Cluster HCCA: Cluster_184


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Neighborhood
BP GO:0002098 tRNA wobble uridine modification IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Neighborhood
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Neighborhood
CC GO:0033588 Elongator holoenzyme complex IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 126 166
No external refs found!