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  5. LOC_Os05g45070.1

LOC_Os05g45070.1


Description : no hits & (original description: none)


Gene families : OG0000858 (Archaeplastida) Phylogenetic Tree(s): OG0000858_tree ,
OG_05_0000544 (LandPlants) Phylogenetic Tree(s): OG_05_0000544_tree ,
OG_06_0000601 (SeedPlants) Phylogenetic Tree(s): OG_06_0000601_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g45070.1
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AT1G64065 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Archaeplastida
AT3G54200 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Archaeplastida
AT4G23610 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.02 Archaeplastida
GSVIVT01035190001 No alias No description available 0.02 Archaeplastida
Gb_17477 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp3g06270.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c21_19270V3.1 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Archaeplastida
Zm00001e019888_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity IEP Neighborhood
MF GO:0004834 tryptophan synthase activity IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005672 transcription factor TFIIA complex IEP Neighborhood
BP GO:0006188 IMP biosynthetic process IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006568 tryptophan metabolic process IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006586 indolalkylamine metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016842 amidine-lyase activity IEP Neighborhood
BP GO:0042430 indole-containing compound metabolic process IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0046040 IMP metabolic process IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
InterPro domains Description Start Stop
IPR004864 LEA_2 120 219
No external refs found!