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  5. LOC_Os05g46290.1

LOC_Os05g46290.1


Description : chaperone (Hsp60)


Gene families : OG0000342 (Archaeplastida) Phylogenetic Tree(s): OG0000342_tree ,
OG_05_0001839 (LandPlants) Phylogenetic Tree(s): OG_05_0001839_tree ,
OG_06_0002105 (SeedPlants) Phylogenetic Tree(s): OG_06_0002105_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g46290.1
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00241820 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.05 Archaeplastida
AT2G33210 HSP60-2 heat shock protein 60-2 0.18 Archaeplastida
AT3G13860 HSP60-3A heat shock protein 60-3A 0.05 Archaeplastida
AT5G56500 No alias TCP-1/cpn60 chaperonin family protein 0.1 Archaeplastida
Cre04.g231222 No alias External stimuli response.temperature.Hsp... 0.02 Archaeplastida
Cre06.g309100 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
Cre07.g339150 No alias External stimuli response.temperature.Hsp... 0.02 Archaeplastida
GSVIVT01012098001 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
GSVIVT01016859001 No alias External stimuli response.temperature.Hsp... 0.14 Archaeplastida
GSVIVT01029025001 No alias External stimuli response.temperature.Hsp... 0.1 Archaeplastida
Gb_32466 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.09 Archaeplastida
Gb_35390 No alias chaperone (Hsp60) 0.03 Archaeplastida
Gb_37654 No alias chaperone (Hsp60) 0.06 Archaeplastida
MA_10436324g0010 No alias chaperone (Hsp60) 0.08 Archaeplastida
MA_13240g0020 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_8569886g0010 No alias Chaperonin CPN60, mitochondrial OS=Arabidopsis thaliana... 0.06 Archaeplastida
Mp1g21640.1 No alias subunit beta of Cpn60 chaperonin complex. component... 0.03 Archaeplastida
Mp5g20470.1 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.02 Archaeplastida
Pp3c4_22500V3.1 No alias heat shock protein 60 0.03 Archaeplastida
Solyc03g121640.3.1 No alias chaperone (Hsp60) 0.04 Archaeplastida
Solyc05g053470.3.1 No alias chaperone (Hsp60) 0.24 Archaeplastida
Zm00001e004641_P001 No alias chaperone (Hsp60) 0.07 Archaeplastida
Zm00001e012733_P002 No alias chaperone (Hsp60) 0.07 Archaeplastida
Zm00001e025409_P001 No alias subunit beta of Cpn60 chaperonin complex. component... 0.07 Archaeplastida
Zm00001e031536_P001 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.03 Archaeplastida
Zm00001e032273_P004 No alias chaperone (Hsp60) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004176 ATP-dependent peptidase activity IEP Neighborhood
MF GO:0004619 phosphoglycerate mutase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006007 glucose catabolic process IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
BP GO:0016052 carbohydrate catabolic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
BP GO:0019320 hexose catabolic process IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046365 monosaccharide catabolic process IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
CC GO:1905354 exoribonuclease complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 60 559
No external refs found!