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  5. AMTR_s00006p00267780

AMTR_s00006p00267780 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00006.304

No description available


Gene families : OG0001678 (Archaeplastida) Phylogenetic Tree(s): OG0001678_tree ,
OG_05_0001798 (LandPlants) Phylogenetic Tree(s): OG_05_0001798_tree ,
OG_06_0003832 (SeedPlants) Phylogenetic Tree(s): OG_06_0003832_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00006p00267780
Cluster HCCA: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01032493001 No alias No description available 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004576 oligosaccharyl transferase activity IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
CC GO:0005850 eukaryotic translation initiation factor 2 complex IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006621 protein retention in ER lumen IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
BP GO:0016255 attachment of GPI anchor to protein IEP Neighborhood
CC GO:0016272 prefoldin complex IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
CC GO:0017119 Golgi transport complex IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0030904 retromer complex IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
BP GO:0032507 maintenance of protein location in cell IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP Neighborhood
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
CC GO:0042765 GPI-anchor transamidase complex IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045185 maintenance of protein location IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
MF GO:0046923 ER retention sequence binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051651 maintenance of location in cell IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
BP GO:0072595 maintenance of protein localization in organelle IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR024395 CLASP_N_dom 127 283
No external refs found!